| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4004 |
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| Symbol | |
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| ID | 8255138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4835562 |
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| End bp | 4836620 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937668 |
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| Product | glycosidase PH1107-related |
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| Protein accession | YP_003094257 |
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| Protein GI | 255533885 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2152] Predicted glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00339526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATC AAGCGCAAAG ATTTATACAA AACCCTTTAT TATCGCCAAA AGAATTGAAG
CCAAGCAGGC CTGGACTGGA GATCACCTGT CTGCTGAACC CCGGTGTTTT TACTTTTGAA
GGCAAAACCT GGTTGCTGGT ACGTGTGGCG GAGAGACCGA AACAACAGGA GGGTTTTATT
TCTTTTCCGG TACTGAAAGG AGGGGGGATT GAAATTATTG AGATCGCGTC GGGTGATCCG
TACCTGAATG CGGATGACCC GCGGGTCATC AGGTATAAAG GGCAGGATTA CCTGACCACC
CTATCGCATT TACGCCTGCT TTGCAGTGAC GATGGTGTTC ATTTTTATGA GCCGGAAGGC
TATCCCCTTT TGCAGGGGGA GACTTTACAG GAAGCTTTTG GGGTAGAGGA TTGCAGGGTA
GCATTGATTG AGGGGATGTA TTACCTGACT TATACCGCTG TTTCCGGGCA GGGTGTAGGG
GTTGGCCTGC GTAAGACCAA GGACTGGAAA ACTTTTGTTT CCGAAGGAAT GATCATTCCA
CCGCACAATA AGGACTGTGC CATTTTTGAA GAAAAGATCA ATGGTAAGTT TTATGCGCTG
CATCGACCGA GCAGTGTTGA TATCGGTGGA AACTACATCT GGATTGCTCA ATCGCCTGAT
GGCATACATT GGGGAGGGCA TAAATGTATT GTTACCACCA GAAAAGATAG CTGGGACAGT
GCAAGGGTAG GCGCCGGGGC TGCGCCCATA AAGACGTCAC TGGGCTGGCT GGAAATTTAT
CATGGTGCAG ATACCGCCCA CCGGTATTGT CTGGGTGCTT TTTTGCTGGA TCTTGATGAC
CCTTCTCTTG TGCTGGCACG CAGTACAGAA CCTATTATGG TACCTACGGC TACTTATGAG
CTGACTGGCT TTTTCGGACA TGTGGTGTTT ACGAACGGCC ATGTAGTGCA GGGCGATGAG
CTGACCATTT ATTATGGTGC TGCAGATGAG TTTGTTTGCG GGGCTAAATT CTCTATTAAT
GAAATATTAA CCTCCCTAAC TTACTATCAT GATTCATAA
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| Protein sequence | MKDQAQRFIQ NPLLSPKELK PSRPGLEITC LLNPGVFTFE GKTWLLVRVA ERPKQQEGFI
SFPVLKGGGI EIIEIASGDP YLNADDPRVI RYKGQDYLTT LSHLRLLCSD DGVHFYEPEG
YPLLQGETLQ EAFGVEDCRV ALIEGMYYLT YTAVSGQGVG VGLRKTKDWK TFVSEGMIIP
PHNKDCAIFE EKINGKFYAL HRPSSVDIGG NYIWIAQSPD GIHWGGHKCI VTTRKDSWDS
ARVGAGAAPI KTSLGWLEIY HGADTAHRYC LGAFLLDLDD PSLVLARSTE PIMVPTATYE
LTGFFGHVVF TNGHVVQGDE LTIYYGAADE FVCGAKFSIN EILTSLTYYH DS
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