| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3996 |
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| Symbol | |
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| ID | 8255130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4823764 |
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| End bp | 4827378 |
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| Gene Length | 3615 bp |
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| Protein Length | 1204 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937660 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003094249 |
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| Protein GI | 255533877 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.238873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAA TTTATACTAA CAAACTTGGT GTACCCTTGC GGTATGTCGA TAGAATATTA
TTTATTATGC GGTTAACCAC CATAATTTTA ATAGCATCCT TAATGCAGGT AAGTGCTGCA
GGTTTTGCTC AACGGATTAT TTTAAATGAG CGTAAAGCAC CACTCGAAAA GATCTTAAAA
GCTATCCGCA CGCAAAGCGG CTATGACGTG ATTATGGAAA GAAAGCTAAT GGACAAAACG
AAATCTATCG ATGTTTCTGT ACAGAACGCT ACTCTTGAAG AAACCATGGA CATTGTACTT
AAGGGTCTAA ATCTGAAGTA TACCATTGAA GGAAAGATCA TCGTAATAGA ACCGGTAAAA
CCTTCTTTTA TGGATAACAT CAGGGCTGCG TTTGCGAATA TTGATGTACG TGGCCGCGTG
GTAGACAGTA CCGGTCATGC CTTACCGGGA GCTAGTGTAA TGGTCAAAGG AAAAAGACAA
ATTGCCAGGG CCGGTACAGA TGGTACGTTT CTTTTGCAAA ATGTTGAAGA AGGGACAATA
CTGGTCATTA GTTACACCGG GTATAAAACC AGGGAGATTG TAGCCTCAAA AGACCTTGGA
ACAATAAGGA TGGATATTGC CGTTGCAAAC CTGGAAGAAG TTGCGGTAAC AGTCAACACG
GGCTACCAAA AAATCAAACC AGAGCAAAGT ACTGGTGCAG TTTCGCAAAT AGGCACAAAG
GAGTACGAAT CCAGGGTGAG CTCCAATTTC CTTGATGGAT TAGTAAACAG GTTACCTGGA
TTGTTAATTA ATAATAGTGT GCAGTTTACC AGTACAGCTC CAGGTGCTAT AAGTTCCACT
TCGAGGCCTT TGTTCAACAT TCGTGGTATT TCAACCATGT CGGCCAACCA AAGTCCACTG
ATTGTAGTTG ATGGCTATCC GACGGAGTTG ACTTTAGATA TGATTGATCC AAATGAGATC
AAATCAGTTA CGATCCTTAA AGATGCCGCT TCTGCCACCG TATATGGAGT AAGAGCCTCC
AACGGTGTCA TCATAATCGA AAGAAAACAA GCTACACCCG GTGCGGCACA GTTCAATTTC
AGGACTACAT TGGGCATTAC ACCAGAGGAA AATTACAGCC GCTACCGTTG GGATCCAGAG
GCATCAGGCA TCAATGCCAA TTACGTACGG GAAAGACAAT CATTAATTAT TACACCTGGT
AGCTGGGGAT TGTTATTTGC ACCAGGAATA CCAAATGGAG GTAACGTACG ACGTTCCATC
CCTTTCTATA TCCAGGCTCA GCTTGCCGCC GGTATCATTA CACCTGCACA GGCTGAAAGC
TCTTTTGCAG AACTGGCTAA TTATGATAAT CTTGATGATT ACAGTCGCTT ATTCCAGCGG
ACGGCAATTG CGCAAACCAA TACCCTGAAC ATTTCAGGCG GTGTGCCAAA CGCGTTATAT
TACATCACGG CCAATTATAC GGGTAACCGT AGTAATGCAG TCCTGAATGA CAACAATAGA
TTTCAACTTA CGGGCCGCAC TACCCTTAAA CTCGCAAAAC GACTGAGCCT GGAACTGACC
ACTGAATATC AGGAAAACCG TGTTAACGGG GCTCCGGTAC CAGGTGCGGC TTCCTATGCG
GGGTATGAGC GTTATGAAGA TGTAAACGGC AACCCTGCCG CCATCATTTC ACAAAGCTAT
GCGCCTGTTT ACAATAGTTT CATCCTGTCA CAGGGTTTGT TGGATCAAAA TTATTACCCT
TTGATTGAAG CGAATAAAGT AAGCAATAAA ACGCGGACGC TAAACAACAA GACCATTGCC
AATTTTAATT ATGATATTGG AAAAGGGTTT AACTTGCTGT TCGGTGGGGT ATATGAAACT
TCCCGTACAG AGTTCAGGCA CCTGGCCGCT CAGGGTTCGA ATGAAGTGAA TTCATTTGTA
AACAATTATA CTGTAACACC TACTGCAGCT AACCCTGCAC TGGCATTCAA AAGGAATCTT
CCTGATGGAG ATTTCCTACG CCAGCAGAAT GCCACCTCAA CTGGCTATAC GGCACGTACG
CAATTGAATT ACAATAAAAG AATGGGTAAC CATTCCCTTA ACGGTATAGC AGGAGCTGAA
ATACGCCGAG TATTAAATAA AAGTAATTTA GCCTCTTATT TTGGCTATAA CGATCAGAGT
TTGCTGCATC AGCCTGTAGA TTACGCTTCG ATATTTAACG GTGTAACGGG AACCAGTGGT
ACACTTGTCA CGGGAAATGG CCTTGGCCTT TTGGAGAATT ATTTCAACCA GGGTTATGAT
GATGACCGGT ATGTATCGGC TTTTTCTAAT GTTGTATACT CCTTTAAAGA TACCTATTCC
TTATCAGGAA GTATCCGTAT CGACCAATCA AACCTTTTTG GTAGTGATCC AAAATATAAA
TACAAGCCCC TGTGGTCATT AGGTGCTGCC TGGAACATAC ATAAGGAAGA TTTCATGAGT
AATTTTAACT GGCTTCACCA GTTAAAACTG CGTGGTGCTT ACGGATTTAA TGGAAATGTA
GCTAAACTTT CGCTTCCGCA GGTCATTGCC CAATCCCGGA ACAATAACGC CAATACACCA
ACACTTCCTT CTCTCGTCCT GTTCTCCAAT GCCAATACGG GCCTTCGCTG GGAACAGACC
GAGAACTTAA ACCTTGGGCT CGATTTTAAT GTTTTCAAAA ATATCACAGG TAGTTTTGAA
TATTACACCA AAAAAACAAC CGATGTGATG GGTAATTCCA GTATTGATCC AACACTTGGT
GCAAACTCTG CCTTAATCAA TTATGCCAGC ATCAGAAATA ATGGCTTAGA GTTTAGCCTG
AAAGCAGACT GGATTTCTAC CAGAGACTTT AACTGGAACA CAGGTATAGT GGTGGCAAAA
AATAGCAGCA AAGTATTAGA TGTCTACAGG ACAGGCCAGT ACAATCCGCA GGTACTTGAT
GTGCTGGGTT ATGTAAGTGG CTATCCGGTA GGTGCTATGT TCTCCTATGA TACGCGCGGG
CTCAATAATG AAGGCCACCC TATTATTTAC GATCAGAACG GGGCATCGTA TGTTGTAAAT
ACAAGTTCCA CGGGTACACC TCTGGTTACT GCAATGTCAG ATAAGAATTC AGGACTGGTA
CAGTATTCGG GAACATCTGT TCCAACTATT AGCGGTGGAT TAAGTAACCG CGTTGACGTT
GGTAATTTTT ATTTCTTCGC CATGATCAAC TATTATGGTG GTTTTAAAGT ACGGGTGCCA
AGACCTACTC CGGCAGAGAA CAGACCTTTG CCAGGGTCGA ACGACTATTG GAGGGTTGCC
GGTGACGAGC TGAAAACAAA CATTCCAAAC CTGACTGATT TGAATAGCTC TGCTCCGGGA
CTGGCTTACC GTTATAATAG CAACTATGTG GTTCATGGTG ATTACATGAC GCTGGGCGAT
GTTACAGTTT CCTACCGCTT AAATGACCTT AAATTCATGA AAAATGTCGG ATTCAAGAAC
TTTGAGCTCA AAGCCCAGGC TTCAAACCTG TACTCCGTCG GATTTAACCG CTATAACTTT
AGCATGGCTA CAGGAAGCTA TGCCAAATCG TATTTAACCC CTACGTATAC GCTTGGTTTG
TTCACCAACT TTTAA
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| Protein sequence | MYKIYTNKLG VPLRYVDRIL FIMRLTTIIL IASLMQVSAA GFAQRIILNE RKAPLEKILK
AIRTQSGYDV IMERKLMDKT KSIDVSVQNA TLEETMDIVL KGLNLKYTIE GKIIVIEPVK
PSFMDNIRAA FANIDVRGRV VDSTGHALPG ASVMVKGKRQ IARAGTDGTF LLQNVEEGTI
LVISYTGYKT REIVASKDLG TIRMDIAVAN LEEVAVTVNT GYQKIKPEQS TGAVSQIGTK
EYESRVSSNF LDGLVNRLPG LLINNSVQFT STAPGAISST SRPLFNIRGI STMSANQSPL
IVVDGYPTEL TLDMIDPNEI KSVTILKDAA SATVYGVRAS NGVIIIERKQ ATPGAAQFNF
RTTLGITPEE NYSRYRWDPE ASGINANYVR ERQSLIITPG SWGLLFAPGI PNGGNVRRSI
PFYIQAQLAA GIITPAQAES SFAELANYDN LDDYSRLFQR TAIAQTNTLN ISGGVPNALY
YITANYTGNR SNAVLNDNNR FQLTGRTTLK LAKRLSLELT TEYQENRVNG APVPGAASYA
GYERYEDVNG NPAAIISQSY APVYNSFILS QGLLDQNYYP LIEANKVSNK TRTLNNKTIA
NFNYDIGKGF NLLFGGVYET SRTEFRHLAA QGSNEVNSFV NNYTVTPTAA NPALAFKRNL
PDGDFLRQQN ATSTGYTART QLNYNKRMGN HSLNGIAGAE IRRVLNKSNL ASYFGYNDQS
LLHQPVDYAS IFNGVTGTSG TLVTGNGLGL LENYFNQGYD DDRYVSAFSN VVYSFKDTYS
LSGSIRIDQS NLFGSDPKYK YKPLWSLGAA WNIHKEDFMS NFNWLHQLKL RGAYGFNGNV
AKLSLPQVIA QSRNNNANTP TLPSLVLFSN ANTGLRWEQT ENLNLGLDFN VFKNITGSFE
YYTKKTTDVM GNSSIDPTLG ANSALINYAS IRNNGLEFSL KADWISTRDF NWNTGIVVAK
NSSKVLDVYR TGQYNPQVLD VLGYVSGYPV GAMFSYDTRG LNNEGHPIIY DQNGASYVVN
TSSTGTPLVT AMSDKNSGLV QYSGTSVPTI SGGLSNRVDV GNFYFFAMIN YYGGFKVRVP
RPTPAENRPL PGSNDYWRVA GDELKTNIPN LTDLNSSAPG LAYRYNSNYV VHGDYMTLGD
VTVSYRLNDL KFMKNVGFKN FELKAQASNL YSVGFNRYNF SMATGSYAKS YLTPTYTLGL
FTNF
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