Gene Phep_3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3990 
Symbol 
ID8255124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4817155 
End bp4818258 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content45% 
IMG OID644937654 
ProductFecR protein 
Protein accessionYP_003094243 
Protein GI255533871 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGG AGCCAACAGA AGATTTACTC GATAAATACA GCCAGGGTGT TTGCACTGCT 
GAAGAAAAAG CATTGGTAGA AAGCTGGTTT CTGCACTGGA AAGCAGATGG CGTTAGCCCT
TCCGCGGCAA GGATTGAGCG GGCCAATAGA GAAGTTATGC GCTCCATTCT GGCTGAAGTA
CCTGTAAAAA AGATCAACAG AAACCGGCAG TTGGCCGGTA TTGCTGCGGC CATATTATTG
CTGCTTGGCA TATCTGTGCT GCTGTTTAGA GAAGGGCCCT TGTCAAAAGC TTACCGTAAT
GACATCGGCC CTGGTGGTAA TAAAGCCACG CTTACCTTAA GCAATGGAAA AGTTATTCCA
TTGAGCAGTA CAAAAACAGG TGTCGTAATT GAGGGGGATC ATTTAACCTA TAATGATGGT
ACTGTGCTGG CATCGCCCCA AAACATGGTA TTAAATGAAG TACAGGTAAG TACACCGCTG
GGCGGTACTT ATCAGGTTAG CCTGCCTGAT GGTACCCGGG TATGGCTCAA TGCGGGTTCT
ACACTTAAAT TTCCTTCAAG CTTTGCAGAT CTTAAGGAAA GAATCGTCCG TTTATCCGGT
GAAGCTTATT TCGAAGTGGC CCGGATCAAA TCTCCGCAGG GCATAAAATT TATAGTAAAA
ACAGCTCAGC AGGAAGTAAG CGTGCTGGGT ACCCATTTTA ACATCAACAG TTACGCAGAT
GAGCCCAATA CCAAAACAAC GCTGCTTGAG GGTTCAGTGC GCCTCTCTGT CCCGCTATTG
CAGAACGGGG GGACAATTCT TAAACCAGGC GAACAGGGAT TTAATGAGGG GCAAAGGATT
GAGGTTAGCA AAGTGGAGGC AGAGGAAGTT ATTGCATGGA AAAACGGGGA ATTTGCATTC
AGCAATGAAA GACTGGAAAG TATCATGCGC AAAATTGCAC GCTGGTATGA TGTTACCGTT
GTTTATGAAA ATAAAAACGT CGGTAACGTA CCATTCGGTG GCAGCATATC CAGGTTTGGC
AAGGTCTCAG AAGTGCTGGA TATGCTCGAA TTAACAGGGA AAGTGAAATT TAAAGTAGAA
GGAAGGAGGA TTACCGTGAA TTAA
 
Protein sequence
MKREPTEDLL DKYSQGVCTA EEKALVESWF LHWKADGVSP SAARIERANR EVMRSILAEV 
PVKKINRNRQ LAGIAAAILL LLGISVLLFR EGPLSKAYRN DIGPGGNKAT LTLSNGKVIP
LSSTKTGVVI EGDHLTYNDG TVLASPQNMV LNEVQVSTPL GGTYQVSLPD GTRVWLNAGS
TLKFPSSFAD LKERIVRLSG EAYFEVARIK SPQGIKFIVK TAQQEVSVLG THFNINSYAD
EPNTKTTLLE GSVRLSVPLL QNGGTILKPG EQGFNEGQRI EVSKVEAEEV IAWKNGEFAF
SNERLESIMR KIARWYDVTV VYENKNVGNV PFGGSISRFG KVSEVLDMLE LTGKVKFKVE
GRRITVN