Gene Phep_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3954 
Symbol 
ID8255088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4756282 
End bp4756719 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content50% 
IMG OID644937618 
Producthypothetical protein 
Protein accessionYP_003094207 
Protein GI255533835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.580538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAT TAAAGAAAGG GATTTTCGGC CCTTTATCCG GAAAACTGGG CGCAATAGTA 
GGGGCCACCT GGATGGGGAT CCCCTACATC CGTCAGGCAC CCAAACAAAA AACTGATCCT
GCCCCGCGGT CGGCCGCCAG GCTTGCCAAT GAGGAAAAGA TGAAGTTTGT AAACAACCTG
CTGGTGCCCT TCCATCCTTA TGTAAATATC GGCTTTGCCA ACCTTGCCAT TGCCAAAACG
GCTTTAAATG CAGCTTATTC GCGCAATTTT CATCAGGCTG TAACCGGTGT GTATCCCAAT
TTGGGGGTAG ATTATACCAA AATGGTGATC AGTGCCGGGG ATTTGCCGGG CTTAAATGAT
CCGGTGATGG CCTTAACGGC CCCCGATGTG ATGGTTACAT CGACCAGAGC AGCTGTTTGC
TGGTGCTGTT TAGCATGA
 
Protein sequence
MAKLKKGIFG PLSGKLGAIV GATWMGIPYI RQAPKQKTDP APRSAARLAN EEKMKFVNNL 
LVPFHPYVNI GFANLAIAKT ALNAAYSRNF HQAVTGVYPN LGVDYTKMVI SAGDLPGLND
PVMALTAPDV MVTSTRAAVC WCCLA