| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3940 |
|---|
| Symbol | |
|---|
| ID | 8255074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4740731 |
|---|
| End bp | 4741681 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 644937604 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003094193 |
|---|
| Protein GI | 255533821 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0963887 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAG TACTTGTTAT AGGTTGTGGA AATATAGGTG CTTTGTATGA TATAAATACA
AATGAGATAA CGACTCATAC CAAGGCATGG CACTCTTATC CTGATAAGGT AGATGTTACA
ATATTTGATA CTGATGCAAA TCTTCTTAAT TTAATAAGTG ATCATTATTC TTGTAAATCT
GTCGAAAATA TTTCTGTAAA AACACTTTCA GCTTTTGATT GTATTAGCAT ATGTACTCCA
ACTTATACAC ATGCTGAAAT ATTGCATAAT GCTTTTTTAG CGAATGTGAA GACTATTATT
TGTGAGAAAC CAATTTCCTT AAAAGAGAGT GACTTTAATA AATTAATAAG ATCATATCAG
GGCAATAACT CTAGGGTTTT GGTTAATTAT ATTCGAAGGT TTCTTCCATC ATTTTCTGAT
CTAAAAAGAA CATTTGAAGA ATTAATGATT GATAATTCGA TTACAAATAT TAGTGTACGA
TATCAACGAG GGTTTTTGAA TAATTGTAGT CATGCATTTG ATCTTATAGA ATATTTATTC
GATAGAAAAT TGCTGTTAGA TGATGTTACT ATTCATAACT CTGTAAATGA TCATTTTGAT
TATGACCCTA CAATCTCTTT GCAGGGGTAT TGGAATGCAA TTAACGTAAG TGTTCAGGGA
CTCAGTAACA TTTTATTTTC CTATTTTGAG ATAGATATTT TTTTAACAAA GCATAAGATA
TCTATAAAGA ACTCCGGAGA TACAATAGAA TTTTTCGAAT CAAATTCAGA AGGTGTTTTT
TTTAAACCTT TGAATTTAGA TATTCAAAAA TCTCAGTACA ACTGTTTAAA AAATTATATG
AAATTTGTAA TAGATGAGGT GCTGCTATTA ATGGATGGGA CAATTCTAGC AGACAACTTT
ATAGATGCGA TTGATCTAAA CCAAAGAATG TTAAAATATA TAAAAAACTA A
|
|---|
| Protein sequence | MYKVLVIGCG NIGALYDINT NEITTHTKAW HSYPDKVDVT IFDTDANLLN LISDHYSCKS
VENISVKTLS AFDCISICTP TYTHAEILHN AFLANVKTII CEKPISLKES DFNKLIRSYQ
GNNSRVLVNY IRRFLPSFSD LKRTFEELMI DNSITNISVR YQRGFLNNCS HAFDLIEYLF
DRKLLLDDVT IHNSVNDHFD YDPTISLQGY WNAINVSVQG LSNILFSYFE IDIFLTKHKI
SIKNSGDTIE FFESNSEGVF FKPLNLDIQK SQYNCLKNYM KFVIDEVLLL MDGTILADNF
IDAIDLNQRM LKYIKN
|
|---|
| |