Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3908 |
Symbol | |
ID | 8255042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4701925 |
End bp | 4702788 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937572 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003094161 |
Protein GI | 255533789 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.078228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTAACC CTCATTACAC TTTCATTATA TTAACCTATA ATGAAGAAAC ACACCTGCCC AGGTTGTTAA ACTCCATTTA TGAATTAAAT GCAGCGGTTT GCATCCTGGA TTCTGGAAGT ACCGACCATA CCATGACCAT TGCAGCAACC TACAATGCAC AAATTAAACA ACATCCTTTT AAAAACCACC CCTGGCAATG GCACCATGCC TTAAGCACTT TTGACATCAA AACGCCCTGG GTTATTGGCC TTGATGCAGA CCAGGTCATT TCTGATGAAC TCAGCACACT ATTGCTGAAC TTTAGAGATG AAGATTACGC AGATGTATCC GGCATCTATT TTAACCGTAA AAATTATTTC AAAGGCCGGT GGTTAAAATA TGGGGGCTAT TATCCTTTCT ATCTTTTAAA AATGTTCAGG TATGGTATCG GTTATTCCGA CCTGAGCGAA AATATGGACC ACCGTTTTAT TGTTCCCGGA AAAACCATCA TCTGGAAAAA TGCTTACCTG CTGGAAGAAA ACCTGAAAGA GAACCAGATC AGCTTCTGGA TAGACAAGCA CAACCGTTAC AGCGACCTGC TGGCGCAGGA AGAAATAGAA CGCAGAAAGA AATTAAGGAT ACAAACCATC AAAGCTTCAT TTTGGGGAAC ACCCGATCAG CGCACTGCCC GGCTTAAGCA AATGTGGTGG CGCATGCCAT TATTTATCCG CCCGGTTATA TATTTCATTT ACCGCTACAT CTTCCGGCTG GGTATACTGG ACGGCTATGC CGGTTTCATT TTCCATTTTA TGCAGGCTTT TTGGTTCCGC CTGGTGGTAG ACATCAAGAT AAAAGAGCTT TTAGATAATG AACAAACAGA CTGA
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Protein sequence | MLNPHYTFII LTYNEETHLP RLLNSIYELN AAVCILDSGS TDHTMTIAAT YNAQIKQHPF KNHPWQWHHA LSTFDIKTPW VIGLDADQVI SDELSTLLLN FRDEDYADVS GIYFNRKNYF KGRWLKYGGY YPFYLLKMFR YGIGYSDLSE NMDHRFIVPG KTIIWKNAYL LEENLKENQI SFWIDKHNRY SDLLAQEEIE RRKKLRIQTI KASFWGTPDQ RTARLKQMWW RMPLFIRPVI YFIYRYIFRL GILDGYAGFI FHFMQAFWFR LVVDIKIKEL LDNEQTD
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