Gene Phep_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3908 
Symbol 
ID8255042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4701925 
End bp4702788 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content42% 
IMG OID644937572 
Productglycosyl transferase family 2 
Protein accessionYP_003094161 
Protein GI255533789 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.078228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTAACC CTCATTACAC TTTCATTATA TTAACCTATA ATGAAGAAAC ACACCTGCCC 
AGGTTGTTAA ACTCCATTTA TGAATTAAAT GCAGCGGTTT GCATCCTGGA TTCTGGAAGT
ACCGACCATA CCATGACCAT TGCAGCAACC TACAATGCAC AAATTAAACA ACATCCTTTT
AAAAACCACC CCTGGCAATG GCACCATGCC TTAAGCACTT TTGACATCAA AACGCCCTGG
GTTATTGGCC TTGATGCAGA CCAGGTCATT TCTGATGAAC TCAGCACACT ATTGCTGAAC
TTTAGAGATG AAGATTACGC AGATGTATCC GGCATCTATT TTAACCGTAA AAATTATTTC
AAAGGCCGGT GGTTAAAATA TGGGGGCTAT TATCCTTTCT ATCTTTTAAA AATGTTCAGG
TATGGTATCG GTTATTCCGA CCTGAGCGAA AATATGGACC ACCGTTTTAT TGTTCCCGGA
AAAACCATCA TCTGGAAAAA TGCTTACCTG CTGGAAGAAA ACCTGAAAGA GAACCAGATC
AGCTTCTGGA TAGACAAGCA CAACCGTTAC AGCGACCTGC TGGCGCAGGA AGAAATAGAA
CGCAGAAAGA AATTAAGGAT ACAAACCATC AAAGCTTCAT TTTGGGGAAC ACCCGATCAG
CGCACTGCCC GGCTTAAGCA AATGTGGTGG CGCATGCCAT TATTTATCCG CCCGGTTATA
TATTTCATTT ACCGCTACAT CTTCCGGCTG GGTATACTGG ACGGCTATGC CGGTTTCATT
TTCCATTTTA TGCAGGCTTT TTGGTTCCGC CTGGTGGTAG ACATCAAGAT AAAAGAGCTT
TTAGATAATG AACAAACAGA CTGA
 
Protein sequence
MLNPHYTFII LTYNEETHLP RLLNSIYELN AAVCILDSGS TDHTMTIAAT YNAQIKQHPF 
KNHPWQWHHA LSTFDIKTPW VIGLDADQVI SDELSTLLLN FRDEDYADVS GIYFNRKNYF
KGRWLKYGGY YPFYLLKMFR YGIGYSDLSE NMDHRFIVPG KTIIWKNAYL LEENLKENQI
SFWIDKHNRY SDLLAQEEIE RRKKLRIQTI KASFWGTPDQ RTARLKQMWW RMPLFIRPVI
YFIYRYIFRL GILDGYAGFI FHFMQAFWFR LVVDIKIKEL LDNEQTD