Gene Phep_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3904 
Symbol 
ID8255038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4696999 
End bp4698210 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content40% 
IMG OID644937568 
Producthypothetical protein 
Protein accessionYP_003094157 
Protein GI255533785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CTTATTTTGA ACAATTCGGA TGGGAAGCTG AGATTGTAAC CGTTGATCCC 
AAATATTCAG ACCTGCAAAA AGACGATCTG TTAATGCAAG GTATTCCTGA AGGGTTACAA
ATACATTATA TACAGGCATT TGATAAAAAA CTAACGTCCC CCTTTGGTTT AGGCAGCCTT
GCGCTAAGGT CGCTATGGTT TTATTTTAGA GGGATCAACA AAATCCTTAA ATCCCAAAGG
TTTGACCTTA TCTATTTTTC AACCACACAA TTCCCTGTTT GTATACTTGG GGCTTATTGG
AAAAAACGGG TTAACATCCC TTATGTCATA GATATGCAGG ATCCATGGCA TTCTGACTAT
TACCAGGATA AACCCAAAGC GCAACGGCCT GCCAAATACT GGTTCTCTTA CCGGCTCAAT
AAATACCTGG AACCCATAGC AATGAAACAT GTAGGTGGAC TGATCAGCGT AGCTGATGAT
TACATACAAA CATTAAAGAA CCGTTACCCA CAGATCAATA AAATTCCCTC ATCAGTAATC
ACCTTTGGAG CATTTGAAAA AGATTTTGAA ATAGCTGAAA GTAATCAGCT CTCATTTAAA
CCTCTTCTCC ACAGCAATAA AATCAATATA GTGTATGTAG GCCGCGGGGG TCTGGATATG
CATACTGCCA TCAAACCGGT CTTTGAAGCA TTATATCGGG GCTTACAAAC GAAGCCTGAA
GTATTTAAAA AACTACAATT TTCATTTATT GGCACCAGCT ATGCTCCGGC CGGACAAGGG
AAAGCAACAG TTTTGCCGCT TGCAAGAAAA TACCAGGTCG AAGAGCAGGT AACAGAAATT
ACAGAAAGAA TAAGTTTTTA TCATACATTA AACACACTTC AGCAGGCAGA TGCCTTATTT
ATTCCGGGTT CTGACGACCC GCAGTATACT GCTTCTAAAA TCTATCCATA CCTGCTGGTA
AAAAAGCCAC TCCTGGCTGT ATTTCATCGA AACAGCAGCG TGGTGGAAAT CGTAAATAAA
TGCATAGTTA ATGCCCGGCT AATCCGGTTT CCGGATAAAA ACATGACTGA TGAACTCTAT
TCTGTATTAA CAAATTGGGC AAACAACATT TTTACATCGC CGGAACTTAC AAAAGCCATA
AAAGAATATA GTGCCGAAAA TATGACCAAA AAACAAACTG AATTGTTTAA CAAAGTTATT
GGCGGGGATT GA
 
Protein sequence
MSLPYFEQFG WEAEIVTVDP KYSDLQKDDL LMQGIPEGLQ IHYIQAFDKK LTSPFGLGSL 
ALRSLWFYFR GINKILKSQR FDLIYFSTTQ FPVCILGAYW KKRVNIPYVI DMQDPWHSDY
YQDKPKAQRP AKYWFSYRLN KYLEPIAMKH VGGLISVADD YIQTLKNRYP QINKIPSSVI
TFGAFEKDFE IAESNQLSFK PLLHSNKINI VYVGRGGLDM HTAIKPVFEA LYRGLQTKPE
VFKKLQFSFI GTSYAPAGQG KATVLPLARK YQVEEQVTEI TERISFYHTL NTLQQADALF
IPGSDDPQYT ASKIYPYLLV KKPLLAVFHR NSSVVEIVNK CIVNARLIRF PDKNMTDELY
SVLTNWANNI FTSPELTKAI KEYSAENMTK KQTELFNKVI GGD