| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3864 |
|---|
| Symbol | |
|---|
| ID | 8254998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4636577 |
|---|
| End bp | 4637779 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644937528 |
|---|
| Product | glycosyl hydrolase family 88 |
|---|
| Protein accession | YP_003094117 |
|---|
| Protein GI | 255533745 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.357687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTATA AATTAAAAAC AAGCTGTTTT GTATTGCTGT TCATGGCTTT TGCCGCGGTG
TCGGTAAATG CCCAGAAACG CTTTAAGCCG AATGGAAATC TATTAAAAGC GGTAAAAAGG
GGTCTGAACG AATCAGCTCT GCAATATCAT TTTTTGATGG AACAGCTACC TGCCGGACGT
TTCCCCGTTA CCTATTACAG TAAAGAACAA AAAATGATTA CCAGCGGCTC CGAGCCCTGG
GTAGGTGGTT TTTATCCGGG GGGGTTACTT TACCTGTATG AAAGCACTAG AGATACAGCG
CTATATAATG AAGCTTTACG CAAACTAAAA TTGCTGGAAA AAGAGCAGTT TAACAAAACT
ACGCACGACC TTGGCTTTAT GATGTATTGT TCTTTTGGAA ATGCCCGAAG GCTGATGCAC
ACAAGCGCAT ACGATCAGAT CATCATCAAC AGTGCAAAAT CACTTTCCAG CCGTTATAAT
GATAAAGTGG GCTGTATCCG TTCATGGGAC TCTGATGCTG CACGTTTCAT GGTCATTATA
GACAATATGG TCAATCTGGA ACTGCTGTTT GCTGCAACAA AATTAACCGG AGATTCCAGC
TATTACCACA TCGCAGTGAA ACATGCGAAT ACCACCATGA AGCACCATTA CCGTGCGGAT
TACAGTTCCT ACCATTTGGT CATCTATAAT CCTGAAACCG GTGCTGTTTC CAAAAAACAA
ACAGTTCAGG GGGCAGCTGA TACTTCAGCA TGGGCGAGGG GGCAGGCCTG GGGATTATAT
GGTTATACTG TAATGTACCG GGAAACAAAG GATAAAAAAT ATCTGGATAT GGCCAATCAC
ATTGCGCAGT TTCTCCTTGG CCACCCCAAT CTGCCGAAAG ACAAGATCCC TTACTGGGAT
TTTAATGCAG CAGGTATTCC CAATGCACCC AGAGATGCAT CTGCAGGTGC AGTGATCTGT
TCAGCTCTGA TCGAACTGGC GGGCTACGCC GGCCCTAAAA TGGCGAAAAC TTATTTTAGT
GCGGCAGAGA CCATGCTTGG GGCGTTGTCT TCTCCTGCCT ATCGTGCTGC AACAGGGGAA
AATGGCGGGT TTATTCTAAA ACATGGCGTT GGTAATTACC CCCGTAATGC AGATATAGAT
GTGCCCCTGA TTTACGCAGA TTATTATTAC ATCGAGGCCC TGTCAAGATA TCAGAAACTA
TAA
|
|---|
| Protein sequence | MHYKLKTSCF VLLFMAFAAV SVNAQKRFKP NGNLLKAVKR GLNESALQYH FLMEQLPAGR
FPVTYYSKEQ KMITSGSEPW VGGFYPGGLL YLYESTRDTA LYNEALRKLK LLEKEQFNKT
THDLGFMMYC SFGNARRLMH TSAYDQIIIN SAKSLSSRYN DKVGCIRSWD SDAARFMVII
DNMVNLELLF AATKLTGDSS YYHIAVKHAN TTMKHHYRAD YSSYHLVIYN PETGAVSKKQ
TVQGAADTSA WARGQAWGLY GYTVMYRETK DKKYLDMANH IAQFLLGHPN LPKDKIPYWD
FNAAGIPNAP RDASAGAVIC SALIELAGYA GPKMAKTYFS AAETMLGALS SPAYRAATGE
NGGFILKHGV GNYPRNADID VPLIYADYYY IEALSRYQKL
|
|---|
| |