| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3814 |
|---|
| Symbol | |
|---|
| ID | 8254948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4579186 |
|---|
| End bp | 4579719 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644937478 |
|---|
| Product | protein of unknown function DUF177 |
|---|
| Protein accession | YP_003094067 |
|---|
| Protein GI | 255533695 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.234061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAACCAT TAAAACAATT TTCAATCCCA TTTACAGGCT TAAAAATTGG CAAACATCAG
TTTGATTTTG AGATTGATAA CAGCTTTTTT GATGCTTTTG AATACTCTTT GGTTAAAAAG
GGGAACTTAA AAGCAGAAGT TGAGCTAGAC AAACAGGAAA CAATGTTAAT ACTACATTTC
CGCATTAGCG GTACCATAGT ATTGGACTGC GATAAATGTT TAGCTGAATT TGGGGCACCG
ATAAATATAC AGGAAAGGCA GATTGTAAAA TTTGCTGAAG ATGAGCTGGA AAGCGATGAT
CTGGAGATCA TTGTACTGAG TAAAAAAGAA AGTGAGATTG ACATCTCTGA ACTGATTTAC
GAATTCATCA CGGTATCGGT ACCTTATATA AAGATATGTG AAGAGAACGG CACTGGAGTA
AAATGCGACC AGGAGATGAT TGCAAGACTG GAAAGTTTAG CGGTTGGATC AAAACAGGAA
GAAGAAGAAC AAAATGACGA CCCAAGGTGG GCAGCGTTAA AGAAATTAAA ATAA
|
|---|
| Protein sequence | MKPLKQFSIP FTGLKIGKHQ FDFEIDNSFF DAFEYSLVKK GNLKAEVELD KQETMLILHF
RISGTIVLDC DKCLAEFGAP INIQERQIVK FAEDELESDD LEIIVLSKKE SEIDISELIY
EFITVSVPYI KICEENGTGV KCDQEMIARL ESLAVGSKQE EEEQNDDPRW AALKKLK
|
|---|
| |