| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3812 |
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| Symbol | |
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| ID | 8254946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4577162 |
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| End bp | 4577944 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644937476 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_003094065 |
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| Protein GI | 255533693 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0974345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTGG TTAGGGCAAA AAAGCATTTG GGGCAACATT TTTTAACCGA TAAAAACATT
GCGGCCAAAA TCGTAAATGG CCTTGTTCAT ACCGATAAAT ACAAACAGGT ACTTGAAGTT
GGGCCTGGCA TGGGTATTTT GTCTGATCTG TTACTGGAGC GAAAAGATCT GGAAACCTAT
TTGATAGATA TTGATGTAGA GTCCTATCAT TTTTTGCAGC AAAAATATCC CCAACTTGGG
AGCAGGTTGA TAAATGGCGA CTTTCTAGCC TTAAACCTGT CGGATATATT TAAGGATAAA
TATGCTATTA TTGGCAATTT TCCGTACAAT ATATCTTCCC AGATTTTGTT CAAAATTCTC
GAAAACAGGT CCAGTGTTGT AGAAATGGTT GGGATGTTTC AAAAGGAAGT GGCAGAACGC
TGCGCTTCAA AAGAAGGGAC CAAAGATTAT GGGATATTGA GTGTGCTGAT CCAGGCCTAT
TATCATATAG AATACCTGTT TACCGTTAAA CCAGGTACAT TTAACCCGCC ACCAAAGGTA
AATTCAGGAG TGATCAGGCT AAGCAGAAAT GCTGTTGAAA CATTACCCTG TGATGAAAAA
CTATTTTGGC GCACGGTAAA AGCAGGTTTT AACCAGCGCA GAAAAACCCT GAGAAATGCG
CTTTCAGGTA TTATCCCCAA AGACAAAATG GACGAACATC CATTTTTTGA CAAAAGAGCC
GAACAGTTGA GTGTGAACGA TTTTATTGTG CTTACCTCTC ACCTGGCTCA GTTGTCAAAG
TAA
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| Protein sequence | MSLVRAKKHL GQHFLTDKNI AAKIVNGLVH TDKYKQVLEV GPGMGILSDL LLERKDLETY
LIDIDVESYH FLQQKYPQLG SRLINGDFLA LNLSDIFKDK YAIIGNFPYN ISSQILFKIL
ENRSSVVEMV GMFQKEVAER CASKEGTKDY GILSVLIQAY YHIEYLFTVK PGTFNPPPKV
NSGVIRLSRN AVETLPCDEK LFWRTVKAGF NQRRKTLRNA LSGIIPKDKM DEHPFFDKRA
EQLSVNDFIV LTSHLAQLSK
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