Gene Phep_3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3809 
Symbol 
ID8254943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4575136 
End bp4575537 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content42% 
IMG OID644937473 
Producthistidine triad (HIT) protein 
Protein accessionYP_003094062 
Protein GI255533690 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.197548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTA TCTTTTCAAA AATAGTAAGC GGTGAAATAC CCGCACATAT TGTAGCAGAA 
ACTACAGAAT TTCTGGCATT TTTGGATGTG AGCCCATTGG TGATGGGGCA CGTGCTGGTG
ATCCCCAAAA AGGAGATCGA TTATATCTTC GATATGGATG AAGAAAGCTA TTTCGGGTTA
ACCTTGTTTG CTAAAATTGT GGCGACAGGT TTAAAGGAAG CTTTTCCATG TAAAAAAGTG
GGCGTTGCCG TAATTGGCCT GGAAGTACCA CATGTGCATA TCCATCTCAT TCCAATGAAT
AATGTAAGTG ATATGAATTT TAGTAGGGCA AAGCTGCAAC CGACGCAGGA AGAACTTGCA
GAGGCGGCGG TTAAGATTAA GGCAGCACTT TCTAAAGATT AA
 
Protein sequence
MASIFSKIVS GEIPAHIVAE TTEFLAFLDV SPLVMGHVLV IPKKEIDYIF DMDEESYFGL 
TLFAKIVATG LKEAFPCKKV GVAVIGLEVP HVHIHLIPMN NVSDMNFSRA KLQPTQEELA
EAAVKIKAAL SKD