Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3809 |
Symbol | |
ID | 8254943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4575136 |
End bp | 4575537 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937473 |
Product | histidine triad (HIT) protein |
Protein accession | YP_003094062 |
Protein GI | 255533690 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.197548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTA TCTTTTCAAA AATAGTAAGC GGTGAAATAC CCGCACATAT TGTAGCAGAA ACTACAGAAT TTCTGGCATT TTTGGATGTG AGCCCATTGG TGATGGGGCA CGTGCTGGTG ATCCCCAAAA AGGAGATCGA TTATATCTTC GATATGGATG AAGAAAGCTA TTTCGGGTTA ACCTTGTTTG CTAAAATTGT GGCGACAGGT TTAAAGGAAG CTTTTCCATG TAAAAAAGTG GGCGTTGCCG TAATTGGCCT GGAAGTACCA CATGTGCATA TCCATCTCAT TCCAATGAAT AATGTAAGTG ATATGAATTT TAGTAGGGCA AAGCTGCAAC CGACGCAGGA AGAACTTGCA GAGGCGGCGG TTAAGATTAA GGCAGCACTT TCTAAAGATT AA
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Protein sequence | MASIFSKIVS GEIPAHIVAE TTEFLAFLDV SPLVMGHVLV IPKKEIDYIF DMDEESYFGL TLFAKIVATG LKEAFPCKKV GVAVIGLEVP HVHIHLIPMN NVSDMNFSRA KLQPTQEELA EAAVKIKAAL SKD
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