| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3760 |
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| Symbol | |
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| ID | 8254892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4505023 |
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| End bp | 4505889 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937422 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003094013 |
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| Protein GI | 255533641 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAGT TTGGCGCATC AATGCTTTCA TGGATTACAA CATGGACCCC CGAAAATAGT
ATATATGCAA TAGAAAAGAC GGCAGACTGT GGATTCGATA TTTTAGAAAT CTCATTGCCT
GCTTCTTTAA ACCTGGATGT ACAAATGGTT AAAAAGCAGC TGTCAGCACA TGGCATAGAG
GGCCGGTATT CATTAATTTT ACCAAAAAAC TGCCACCTTC CTCAATATCC TGATCAGGCA
TTGAGCTTAT TAAATAAGGC AATAGATCTG GTTGTAGAAA TGGAAGGCCG ATTTTTGGGT
GGGGTGCTTC ATTCAGCTAT CGGTGCTTTC ACAGGAAGTC CATGTACGGA GGACGAACGT
GCTGTTATAC GGGATGTCTT TATCGCGGTT TGCCGTTATG CCGAAAAAAA TGGCGTCATG
CTAGGCCTGG AACCCATCAA CCGTTACGAA AGTTATGTCA TTACTGCTGC TCAGGAAGTG
CTTGATCTGG CAATTGAGGT ACAGAGCCCC GCACTTGGAC TGATGCTCGA CACTTTTCAT
ATGAACATAG AGGAATCCAA TTTTTATGAT CCTGTGGTAT TGGCCGGGAA TAGATTAAAA
TATGTTCATA TGACCGAAAG TAACCGGGGC ATGTTAGGCG AGGGGAATGT ACACTGGGAT
GATTTTTTCA GGGGATTAGC CCAGATTAAT TATACCGGCG ACCTAGTCCT GGAGAATTTC
TCCTCTCAGG TTTCAGGAAT GTCGGGGATG ACTTCGTTAT GGAGGCCGTC GAAATATGAT
GCAGCTGCAT TGGCAAAAGG CAGTCTGCAT TTTATGAAGC AGAAAGCCCA ACAATGGGGA
TTAAATACCC GTTTTATTTC ACACTAA
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| Protein sequence | MIKFGASMLS WITTWTPENS IYAIEKTADC GFDILEISLP ASLNLDVQMV KKQLSAHGIE
GRYSLILPKN CHLPQYPDQA LSLLNKAIDL VVEMEGRFLG GVLHSAIGAF TGSPCTEDER
AVIRDVFIAV CRYAEKNGVM LGLEPINRYE SYVITAAQEV LDLAIEVQSP ALGLMLDTFH
MNIEESNFYD PVVLAGNRLK YVHMTESNRG MLGEGNVHWD DFFRGLAQIN YTGDLVLENF
SSQVSGMSGM TSLWRPSKYD AAALAKGSLH FMKQKAQQWG LNTRFISH
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