Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3740 |
Symbol | |
ID | 8254872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4463674 |
End bp | 4466838 |
Gene Length | 3165 bp |
Protein Length | 1054 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644937402 |
Product | hypothetical protein |
Protein accession | YP_003093993 |
Protein GI | 255533621 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTCAA ATTTTTGGAC AAGGCAGATT TTGTTGGTTT TGTTACTGCT GGCAGGAAGT CCTGCCCTTG CCCGCAGCTG GATGCCCGGC TATAATTTCA GAAAGAAAAT AACCATTGAT CAATCGAAAG TTTCCGGTAC GGCCAGTCTT TTAAACTTTC CTGTGCTGAT TGTCCTTGAG GATGCTGAAC TCAGGTACAT CGGCAATTGC GAAGGAAGGT TGCAGAACAG CAGGGGGCTG GATATCTCCT TTGCGGCAAC CAATGCCCCT CAGCTGCCGC TTGCTTTTCA GCTTGACCAT TATGATGCGG TTAATGGGAA ACTGGTGTGC TGGGTAAACA TTCAGGAGCT ATTTACCGGC AGCAATCCTG GCCATAACGA AATCTATCTT TATTATGGCT CAACCTATAT CCACGACCCG TTTACGCTTT CTGCAAGGGC CACCTGGCCG GCCAGCTATC AGCAGGTCTG GCACCTGAAC CTGGATGCTG CACCTTCCAT AAGCCGCAGT GCAAATCATG GTCCGGAGAT GAGTATGACA GGGAGTCCGG GAACAGGGCC GGCTAACTTC CCTGCCGCCC ATATTGGCAA TGGACTGTTG CTGAATGGCA GTACGGATGG GATGGCTGCT GCAGCAGATA CCAATACGAC GGTTTGCATT ACCGCCTGGA TTAAAATGGA TCACAGGGGC ACTGAGCAGG TGATTTTAGC CAGCGACACC ACTGCTGGCG GATATGTCAT TAAGGTGAAT GCCCAGGGTA ACCTTGTTTT TGAAACTAAA AATGCTGAAG GTTTCAGAAG TGCCACAACC GCCGAGGTAT TGGCAGTAAA TACCTGGTAC AATCTTGCCT GTATTTTTAT TAAAGGGATA AGAAGAATAT ACATCAATGG GGCATATAAA GCTGGCGGCG GATCAAATGG GGTAAAGCTT GGGCGGTCGG GGGCATTGAG TATTGGAAAA AGTAAACAGA ATGGCAGCTA TTTTAAGGGC ACAATTGATG AACTGAGGAT TCAAAATGTA GAGCGTAATG TCGACTGGAT CAGCACTGAA TACAGGAACC AGGCTAATCC GGCCAGTTTT ATCAGCGTTG CAGCTGAGGA AATTAATCCG GCAAATGTTC CGGTGGTCAA CGAGTTTACC GGAGCTGCCG GAACGGAAGA CTGGTCGGAC GAGGGGAACT GGAGTTTGGG GGGCTTACCT GCACAAAATG CTCAGGTGAT CATTAAAGGA GGTAAAAAAA CGAAGCTTTT AGCTCCTGCG GCAACCATCA TTAATCAGCT CACTTTAGAA CCCGGGGCAA GACTTCATCT GCAGAGCGGC CTTGAAGTGA ATTGTGCGGC CAGTATTGCA GCAAATGCTG CTGTAGTACT GGAGGATGGA GCAAGGCTCA CTTTTAAATA CGATGTGCTG AACCATGGCC GCATTGGTTT AAATAAGGGT CATGGCAGTC TTGTTTTCAG GGGAGGGCAT GCATTGCAAA CGCTTTCAGG TACAGGCCTG GTTACTGTTT CGCGGCTCGA AGTAGAGCTG GCCTCGGCTA CCCATACGCT GTTGCTGCAA TCCCCGCTAA ATGTGGGCAG ACAGGTGCAG CTGATCAGGG GAACCCTCAA TTCCAACGGA AACCTCAGCC TGCTTGCCGA TACCTTAAAT TATGGTGCCG CATTGATGCC GGTAACAGAT CCCGGTAATA CACAGCTCAC AGGAGATGTA CACGTACAGC ATTTTGTGAA AGGTAACTTT GCTGCCCCTT CAACGGCAAG GGGCTGGTGC TTGCTGGCTG CTCCCGTATA CCGGTCTGAA TTAAACGGGC AGCCGCAAAA TAATTTTGCG GCCATTCAGG CCAGTGTCTT TGTAACCGGT ACTGGCGGCA CTTTAAATGG CTTTGATGCC TCGCCCAATA ATGGAGGAAC GATTTATACC CACGATCAGT CCTTACCCGG CAGCCTTTCA CAAAAATACA AGGCCATTCC CAGTATGGAT GTCAGCATCC CATCCGGAAA GGGTTTTTAT CTGTTTTCAA GAGGCAGCAG GAATATTCCC GATGCCTACC TGCACCAAAT CCAGACACCT CCGTTTTCTA ATCCAGGGCC TTACACCATT ACCTATACCG GTAAATTGTA TACAGGCGAT TTAACGGTAA ACCTTTTTAA CAGGAACAGC GGGGGAGAGG GCGATGGTTT TAACCTGCTC GGAAACCCGT ATGCTTCGGC AATCCGCTGG GCCGCATTGC AAAAACAAAA TGTTAGTCCC TTCATCTGGG TATTCAATAC ACAAAACAAT GCCTATCAGG TTACAGACGA CCCGGATTAT ATCATCCCTT CGGGAACTGG CTTTTTTGTG CGGGTAAACA GCGGAAATGC CAGTGGTTCG CTCAGTTTTC AGGAAAGCGC AAAATATACC GGTACTACTG TTCCGGCAGC GCAGATGGCC CTTAGGGAGT CCCGAAGGGC AAAGGAAACA ACAAGCAGGT TAAAAATACA GCTGTATGCA GCCGGACTGA CCGACAGTTA TACATTGATT TTTAGCAGCA AAGGTAATGA TGGGATAAAT GATGCAGATG CCGGAAAAAT TGGAGAAGGT TACCTGAGCA TTGCAGGGAT AGCCGGGAAC GGAACAAAAT TGTCTATAGA TGAGCGCGCA ATAGACACCC TCCGAAAAGA GGTCTGTTTG TACCTAAAGG GCTGGGCAAG CGGAAATTAT ACTTTAAATT TAAAAGCATC GCTTAAACCC AATGAGGAAA TTGTACTGGC CGACCGTTAT CTTGGTATCA ATAAACGTTT AACAGAACCG GAAAGCAATT GCCATTTTTT TATAGACACC GCCATTCCGG CATCTTACGG TCAGCAACGC TTTGCTATTC TGTACAGGGA GCTCCCGGAA GTAAAGCAAC AAGATACCGA AACCGATAAA AACATTGTGG TATATCCCAA TCCCTTTAAG GAGTGGCTTT ACCTGAAGTC GGCCAGGCTG ACCTATAAAA ATCTGAAAGT TTTAATCAGG GATATCACGG GCAGGGTAGT CTGGAGTAGC GTGCTTCCCA TTCTGGATGC GGGTATTCCG GTTCAGCAGT ACTGCGGGCA GCTGGTAAAA GGGGTCTATT TTTTACAACT GCTTAATCCG AAAAACAATA AAGTGGAGGC TGTTTTTAAA GTATTGCGAA ACTAA
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Protein sequence | MYSNFWTRQI LLVLLLLAGS PALARSWMPG YNFRKKITID QSKVSGTASL LNFPVLIVLE DAELRYIGNC EGRLQNSRGL DISFAATNAP QLPLAFQLDH YDAVNGKLVC WVNIQELFTG SNPGHNEIYL YYGSTYIHDP FTLSARATWP ASYQQVWHLN LDAAPSISRS ANHGPEMSMT GSPGTGPANF PAAHIGNGLL LNGSTDGMAA AADTNTTVCI TAWIKMDHRG TEQVILASDT TAGGYVIKVN AQGNLVFETK NAEGFRSATT AEVLAVNTWY NLACIFIKGI RRIYINGAYK AGGGSNGVKL GRSGALSIGK SKQNGSYFKG TIDELRIQNV ERNVDWISTE YRNQANPASF ISVAAEEINP ANVPVVNEFT GAAGTEDWSD EGNWSLGGLP AQNAQVIIKG GKKTKLLAPA ATIINQLTLE PGARLHLQSG LEVNCAASIA ANAAVVLEDG ARLTFKYDVL NHGRIGLNKG HGSLVFRGGH ALQTLSGTGL VTVSRLEVEL ASATHTLLLQ SPLNVGRQVQ LIRGTLNSNG NLSLLADTLN YGAALMPVTD PGNTQLTGDV HVQHFVKGNF AAPSTARGWC LLAAPVYRSE LNGQPQNNFA AIQASVFVTG TGGTLNGFDA SPNNGGTIYT HDQSLPGSLS QKYKAIPSMD VSIPSGKGFY LFSRGSRNIP DAYLHQIQTP PFSNPGPYTI TYTGKLYTGD LTVNLFNRNS GGEGDGFNLL GNPYASAIRW AALQKQNVSP FIWVFNTQNN AYQVTDDPDY IIPSGTGFFV RVNSGNASGS LSFQESAKYT GTTVPAAQMA LRESRRAKET TSRLKIQLYA AGLTDSYTLI FSSKGNDGIN DADAGKIGEG YLSIAGIAGN GTKLSIDERA IDTLRKEVCL YLKGWASGNY TLNLKASLKP NEEIVLADRY LGINKRLTEP ESNCHFFIDT AIPASYGQQR FAILYRELPE VKQQDTETDK NIVVYPNPFK EWLYLKSARL TYKNLKVLIR DITGRVVWSS VLPILDAGIP VQQYCGQLVK GVYFLQLLNP KNNKVEAVFK VLRN
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