Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3725 |
Symbol | |
ID | 8254857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4445635 |
End bp | 4446102 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937387 |
Product | regulatory protein MarR |
Protein accession | YP_003093978 |
Protein GI | 255533606 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAGC AGGAAACAAT AGATTATTTT TTGAAAGTAG TTTGGCAAAA TGTATCCAAT ACATACAACC AGATCGCTTC GGGCTTTGGC ATTACGCAGG CCATAGGGTA TGTGCTGATC AATATTGATA AGGAAGGTAC GGCGGTTTCG CAGCTGGCCG GGCTGCTCGG GGTAAAGGCC ACCAGTTTGT CAAGAATGCT AAACAATATG GAAGATTTGG GGTTAATATA CAGGGAAACT GCTGCCGGAG ACAAACGCTC CGTAAAAGTT TACCTGACCG GACTGGGTTA TGAAAAAAGG CATATGGCCA AAGGTGTGGT AATCGCATTT AATGAATACC TGAACAAGAA CCTCTCTGCA ACGGAGAAAA ATAACCTGCT GGTTACTTTG CAAAAGGTGA ATAAGCTGAC CCTGGGCTAT AAAGTTCCTG AAGAAGTGGT TCAGGCTTCC GGGAACGAAC AGGATTGA
|
Protein sequence | MKQQETIDYF LKVVWQNVSN TYNQIASGFG ITQAIGYVLI NIDKEGTAVS QLAGLLGVKA TSLSRMLNNM EDLGLIYRET AAGDKRSVKV YLTGLGYEKR HMAKGVVIAF NEYLNKNLSA TEKNNLLVTL QKVNKLTLGY KVPEEVVQAS GNEQD
|
| |