Gene Phep_3725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3725 
Symbol 
ID8254857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4445635 
End bp4446102 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content44% 
IMG OID644937387 
Productregulatory protein MarR 
Protein accessionYP_003093978 
Protein GI255533606 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC AGGAAACAAT AGATTATTTT TTGAAAGTAG TTTGGCAAAA TGTATCCAAT 
ACATACAACC AGATCGCTTC GGGCTTTGGC ATTACGCAGG CCATAGGGTA TGTGCTGATC
AATATTGATA AGGAAGGTAC GGCGGTTTCG CAGCTGGCCG GGCTGCTCGG GGTAAAGGCC
ACCAGTTTGT CAAGAATGCT AAACAATATG GAAGATTTGG GGTTAATATA CAGGGAAACT
GCTGCCGGAG ACAAACGCTC CGTAAAAGTT TACCTGACCG GACTGGGTTA TGAAAAAAGG
CATATGGCCA AAGGTGTGGT AATCGCATTT AATGAATACC TGAACAAGAA CCTCTCTGCA
ACGGAGAAAA ATAACCTGCT GGTTACTTTG CAAAAGGTGA ATAAGCTGAC CCTGGGCTAT
AAAGTTCCTG AAGAAGTGGT TCAGGCTTCC GGGAACGAAC AGGATTGA
 
Protein sequence
MKQQETIDYF LKVVWQNVSN TYNQIASGFG ITQAIGYVLI NIDKEGTAVS QLAGLLGVKA 
TSLSRMLNNM EDLGLIYRET AAGDKRSVKV YLTGLGYEKR HMAKGVVIAF NEYLNKNLSA
TEKNNLLVTL QKVNKLTLGY KVPEEVVQAS GNEQD