| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3693 |
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| Symbol | |
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| ID | 8254824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4406565 |
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| End bp | 4409210 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937354 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003093946 |
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| Protein GI | 255533574 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000588542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA ATGGATCAGT CAGGTTTCTG ACACTCATTA CCTTAATATT GCTTTTACTG
GCCTTGGCAC AAGTTAGGGC ACAAGCACAG GAGCAGCTTA CCAGAAAAAT AACAATTACC
TTAAAAGATG AAATATTGAA AAATGCACTC GATAAGATCA CGAGTGTAAG CGGTGTTAAG
TTCACTTATA ATGAACTGGT GGCCAAGAGT AAAATAACCA TTAGCGTAAA TGCAAAAGAT
AAGCCGCTTT CGGCAGTGCT TACCACAGCA TTTGCCGGAC AGCCACTTCA GTTTAGTGCA
CTTGACAAAG AAATTTTTAT ACGTTTAGAT CTTGCTAAAG AAAAAAAGCC GGAAGCCGGC
CCGGCGGCAA ATCCGGTGAC AAGTCTGGAA AAACACACTT TAAGTGGTAC TATTAAATCT
GCAGCCACAG GAGAAACACT GATAGCGGCC ACCATCAGGG TTGCGGATAC CAAATTTGCC
ACTTTAAGTA ATGAATACGG ATTTTATTCT ATAACCCTAC CAAAAGGCAA TTATAACATT
GAGGTAAAAG CAGTGGGCGC TAAAAGTTAT AAAGCCAAGG CAGATCTAGA TAAAAACATC
GTCTTAAATG TGGCACTGGA TGATGATTTA AATGAACTTG AAACAGTAAC CATCACCACA
AAAGCCAGCA AAAGAGATAT TGAAAGTCCG CAAATGGGTA TGGAACGACT TAGTATCAGT
GAAACTAAAA ATGTTCCGGT GTTGCTGGGC GAAAGGGATG TAATTAAAAC CCTGCAGCTT
TTACCAGGTG TAAAAACATC GGGCGAAGGG AGTGGGGGTT TCTTTGTACG TGGCGGCAGT
GCCGATCAGA ACATGATCCT TTTAGATGAA GCTCCGGTTT ACAATGCCAC CCACTTACTC
GGCTTTTTCT CTACTTTCAA TTCCGATGCC ATTAAAAATG TAACCCTTTA TAAAAGTGGC
ATGCCTGCCC AATATGGAGG CGCTTTATCT TCTGTTCTGG ATGTTAAAAT GAACGATGGC
AACAATCAGA AATTTGGGGT AAGTGGTGGC ATAGGCCTTA TTGCAGCCCG TATCAATGTA
GAGGGGCCCA TACAAAAGGA TAAATCTTCT TTTCTCATCT CGGCAAGAAG AACCTATGCA
GATATGTTCC TTAAGCTTTC CAGCGATTCG GCTACCAAAA ATTCCCAGCT GTATTTTTAC
GATATCAATC TTAAAGCAAA CTACTTCTTA GGCGAAAAAG ACCGCTTATT TATTTCAGGC
TATTTTGGTA AGGATATCCT GAAGTCTGAT AACCTTTCGG GAATAGACTG GGGCAATGCC
ACATCGACCA TAAGATGGAA CCATATTTTT AGCAGCAAGT TATTTTCCAA TACCTCATTG
ATATTCAGCA ATTACAATTA TAAGATTCAG TCGAACAGTG ACGAAAGCTC CGTCAGACTC
TTCTCACAAA TCAGGGACTG GAACTTCAAG GAAGACCTGC AATGGTATGC CAACGATAGA
AATACACTTA GTTTGGGGTT TAACTCCATT TTTCATACCA TCAAGCCCGG AGAAGTACAG
GCCAATGGAG ACTCCGGCTT TATTTCTCAG AAACTTCAGG ACAGATATTC CATGGAAAAT
GCTGTTTACC TGAGTAATAC CTGGAAAGCC AGCACTGTTC TTAATTTTAC TTACGGCTTA
AGGGTTTCGG CTTTCAGCAT TCTTGGAAAA GGTGAGTATT ATACCCTGGA CACGGAAGGG
AATGTAACCA GTTCAACGAA TTACAAACCT GGTGACTTGG TTAAAACCTA TGTAAACCTG
GAGCCCCGTT TCGCAGCAGC GCTACAGCTA AACAGCACCA CTTCAATTAA GGCTTCTTAT
GTGAGAAATG CCCAGAACCT GCACCTGATT GCCAACTCAA ATTCTTCATC ACCTACAGAC
AGGTGGGTTG CAAGTACCAA TATCATTAAA CCTGAACTTA GCGATCAGGT ATCACTGGGC
TATTACAAAA ACCTGGGTAC TGATGCTTAT GAGCTCACTG TTGAAACATA TTATAAAACG
CTTCAAAATC AGATCGACTA CCGTAATGGT GCCGACATTT ACACCAACAG GCCCATAGAG
ACCCAATTGC TATTTGGTAA GGGAAGGGCT TATGGTATCG AATTTCTGAT CAAAAAGAAA
ACAGGTCGGT TAACAGGCTG GCTGGCCTAT ACTTTGTCTA AAACCGAAAG AAAAATAGAT
GGCATCAACA ACAATACCTG GTATAATGCC AGACAGGACA GGACACACGA CATTTCTATA
GTAAGCATGT ACCAGCTCAG TAAAAGATGG TCTCTATCAG CCAATTGGGT ATTTGCCACA
GGAAATGCCG TTACCTTTCC AAACGCAAAA TACAAAATGC TCGGGCACAG TTATTTCTTT
TTCTCGGAAA GGAATGCCGA CAGGATGCCG AGCTATCACC GCCTGGATCT GGGTGCAACA
AGGCAGCTAA AACAGACCAA AAAGTTCTCA TCAGAACTTA ATTTCAGTCT TTATAATGCT
TACGGACGCG AGAATGCCTA TCGCATTACT TTTAGGGATA AGGAAACAGA CCCCAACAGA
ACAGAAGCCA TCAGAACAAC GCTTTTCAGG TTCGTTCCGT CAATTTCGTA TAATTTTAAA
TTTTAA
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| Protein sequence | MKSNGSVRFL TLITLILLLL ALAQVRAQAQ EQLTRKITIT LKDEILKNAL DKITSVSGVK
FTYNELVAKS KITISVNAKD KPLSAVLTTA FAGQPLQFSA LDKEIFIRLD LAKEKKPEAG
PAANPVTSLE KHTLSGTIKS AATGETLIAA TIRVADTKFA TLSNEYGFYS ITLPKGNYNI
EVKAVGAKSY KAKADLDKNI VLNVALDDDL NELETVTITT KASKRDIESP QMGMERLSIS
ETKNVPVLLG ERDVIKTLQL LPGVKTSGEG SGGFFVRGGS ADQNMILLDE APVYNATHLL
GFFSTFNSDA IKNVTLYKSG MPAQYGGALS SVLDVKMNDG NNQKFGVSGG IGLIAARINV
EGPIQKDKSS FLISARRTYA DMFLKLSSDS ATKNSQLYFY DINLKANYFL GEKDRLFISG
YFGKDILKSD NLSGIDWGNA TSTIRWNHIF SSKLFSNTSL IFSNYNYKIQ SNSDESSVRL
FSQIRDWNFK EDLQWYANDR NTLSLGFNSI FHTIKPGEVQ ANGDSGFISQ KLQDRYSMEN
AVYLSNTWKA STVLNFTYGL RVSAFSILGK GEYYTLDTEG NVTSSTNYKP GDLVKTYVNL
EPRFAAALQL NSTTSIKASY VRNAQNLHLI ANSNSSSPTD RWVASTNIIK PELSDQVSLG
YYKNLGTDAY ELTVETYYKT LQNQIDYRNG ADIYTNRPIE TQLLFGKGRA YGIEFLIKKK
TGRLTGWLAY TLSKTERKID GINNNTWYNA RQDRTHDISI VSMYQLSKRW SLSANWVFAT
GNAVTFPNAK YKMLGHSYFF FSERNADRMP SYHRLDLGAT RQLKQTKKFS SELNFSLYNA
YGRENAYRIT FRDKETDPNR TEAIRTTLFR FVPSISYNFK F
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