| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3652 |
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| Symbol | |
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| ID | 8254783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4366091 |
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| End bp | 4366972 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937313 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003093905 |
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| Protein GI | 255533533 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.449047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAG ATTTAAGCAG AAGAACTGCA TTGAAAAACA TTGTTGCCGG AACTGCTGCT
TTAGGCGTTT CGGCAGCAAT ACCCGCTTTT GCTGCAGCAT CACAACAATC CACTATGTTA
AAAGGAAATG TAAACCACGC TGTGTGCCGC TGGTGTTTTA GCAAGATGGA CCTGGACAGC
CTGTGTATTG AAGCCAAAAA GATTGGCATT AAAGCCATTG ATCTGGTAGG GCCTAAAGAC
TGGCCTACAC TTAAAAAACA TGGCCTGTAC TCATCTATGT GCAACGGCGC CGAGATTAAC
CTGGTAGACG GGTGGAACGA CCCGCAATTT CACCCTACAT TGATCAAAAA CTATTCGGAA
ATGATTCCTA AAGTGGCAGA AGCCGATTAT ACCCAGCTCA TCTGTTTTAG TGGGAGCCGT
CGCGGTAAAG ATGACGAAAC AGGATGGAAA AACTGTGTAG ATGGTCTGAA ACAGGTATTA
CCACTGGCAG AAAAACATGG TGTGGTACTG GTTATGGAAC TGCTGAACAG TAAGGTTAAC
CATAAAGATT ACCAGTGCGA CCATACAGAA TGGGGTGTTG AACTGTGCAA AAGACTAGGT
TCTGAAAATT TTAAACTGCT ATACGACATT TACCACATGC AGATTGATGA GGGCAATGTC
ATCAGCAATA TACAAACCTA TCACCCTTAC ATTTCGCATT ATCATACTGC CGGTGTACCT
GGAAGGAATG AGATTGACGA TACCCAGGAA CTGTATTACC CCGCCATTGT TAAAGCGATT
GTGGCTACGG GCTTTAAAGG CTACCTGGCA CAGGAATTTA TTCCTAAATA TGCAGATAAG
ATCAAATCAT TAAGAGACGC CGTAAATATA TGCGACGTAT AA
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| Protein sequence | MNKDLSRRTA LKNIVAGTAA LGVSAAIPAF AAASQQSTML KGNVNHAVCR WCFSKMDLDS
LCIEAKKIGI KAIDLVGPKD WPTLKKHGLY SSMCNGAEIN LVDGWNDPQF HPTLIKNYSE
MIPKVAEADY TQLICFSGSR RGKDDETGWK NCVDGLKQVL PLAEKHGVVL VMELLNSKVN
HKDYQCDHTE WGVELCKRLG SENFKLLYDI YHMQIDEGNV ISNIQTYHPY ISHYHTAGVP
GRNEIDDTQE LYYPAIVKAI VATGFKGYLA QEFIPKYADK IKSLRDAVNI CDV
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