| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3648 |
|---|
| Symbol | |
|---|
| ID | 8254779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4362265 |
|---|
| End bp | 4362672 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644937309 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_003093901 |
|---|
| Protein GI | 255533529 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4654] Cytochrome c551/c552 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CACTATTTAT CCTGGGCTGC TATGTACTCG CAATGACAGC TTGTGCAAGT
CCGGAAGAAA GGGCCGCTGC CCTTAAACAA GCAGAAACTA CTAAAGATAC TGCCGGGAAT
GGGCCGGCAA CTACTGCATC TGCGGCCGAC ATTACAGCGG GGGAACAATT GATTGCAAAG
AATGACTGCA TTGGCTGCCA CAATAAAGAC AATAAGATCA TTGGCCCAGC CTATGTAGAC
ATTGCGGCCA AATATCCTTT AAATGAAGAA AATGTGAACC ACCTGGTAGA GAAAGTCATC
AGTGGTGGTA AAGGGGTATG GGGCGAGATC CCGATGACAC CTCACGACGC CTTAAATAAG
GATGATGTAA AAAAAATGGT TACTTATATT TTATCGGTCA AAAAATAA
|
|---|
| Protein sequence | MKKTLFILGC YVLAMTACAS PEERAAALKQ AETTKDTAGN GPATTASAAD ITAGEQLIAK
NDCIGCHNKD NKIIGPAYVD IAAKYPLNEE NVNHLVEKVI SGGKGVWGEI PMTPHDALNK
DDVKKMVTYI LSVKK
|
|---|
| |