Gene Phep_3644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3644 
Symbol 
ID8254775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4357622 
End bp4358311 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content47% 
IMG OID644937305 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_003093897 
Protein GI255533525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA GAGAAGCGGT GAGAAGTGTT GCCTTTTTAA TGGGCGGCGC ACTATCGGCA 
ACTACAATTG GCGTATTTTT AGAAAGTTGC AATTCACCAT CCACTAAAAC AAACGGAACT
TTATTTACCG ACGATCAGCA AAAGCTGATC ACCGAAGTTG CAGACATTAT TATTCCTACC
ACCAGCTCTC CCGGGGCCAA AGCCGCAGGA GTTGGGCCAT TCATCAGCAT GATGGTTAAA
GACTGTTATC CCGATGATGC GCAAAAGGCT TTTGTGAAAG GGCTGGAGGA CCTGGACAAG
CAGTCGAAGG AAACCTACAA GAAATCTTTT CTGGAACTGA GCGTGGCACA ACGCCAGGAA
CTGCTGGGTA AAGTAAGGGA TGAAACAGTT GCAGCTACCA AGGCCGAAAA GGAAAATCTT
GACAAGCAGC AGCAGGCCGA AAAAGATAAA CAAAAGACAA ATCCGGCAGA TGCCGCCAAA
TCGCAGACAG AGAATGCGGG CAACATTTCG ATCTTACCGA AGGACAAGCC TAAAATGGAA
CCTCGTTTTT TTGCCATCAT CAGGGATTTA ACGTTACTGG GCTATTTTAC TTCAGAGATA
GGTGCTACAC AAGCATACGC TTTTGTAGAG ATCCCGGGCC GTTACGATGG TTGTGTAGAC
CTGAAACCAG GTCAGAGAGT TTGGTCGTAA
 
Protein sequence
MNRREAVRSV AFLMGGALSA TTIGVFLESC NSPSTKTNGT LFTDDQQKLI TEVADIIIPT 
TSSPGAKAAG VGPFISMMVK DCYPDDAQKA FVKGLEDLDK QSKETYKKSF LELSVAQRQE
LLGKVRDETV AATKAEKENL DKQQQAEKDK QKTNPADAAK SQTENAGNIS ILPKDKPKME
PRFFAIIRDL TLLGYFTSEI GATQAYAFVE IPGRYDGCVD LKPGQRVWS