Gene Phep_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3643 
Symbol 
ID8254774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4356407 
End bp4357354 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content45% 
IMG OID644937304 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003093896 
Protein GI255533524 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCG AAAAAATATT AGTATTGGGA TCCAACGGTC AGATCGGCAC AGAGTTGGTT 
ACTGCATTGC GGAAGACCTA TAGTGAAGAT AATGTGATCG CCTGCGATAT CCGCCGGCCT
GATTATGACA TTAAGAATTC CGGACCTTTT GAATTTGTGA ATGTGCTGGA AAAAGAAACA
CTGAACACCA TTTTCCAAAA ATATAAACCT ACACAAGTAT ATCTGCTGGC CGCTTTGTTA
TCGGCTACAG GTGAGCAAAA CCCAAAGCTG GCATGGGACC TGAACATGAA CGGTCTGCTC
AATATTTTAG AGCTGGCCAT CACCTATAAA ACTGCAAAAG TATACTGGCC AAGCTCTATA
GCCGTTTTTG GTCCCAATTC GCCTAAAGAC CAGACCCCGC AGTTTTGTGT GATGGATCCG
AACACGGTAT ATGGGATAAG CAAGCTGGCA GGCGAGCGCT GGTGCGAATA TTACCACCAG
AAGTATGGGC TTGATGTGCG CAGTATCCGT TATCCAGGAC TGATCAGCTG GAAGGCTGCA
CCGGGTGGGG GTACTACAGA TTATGCCATC CATATTTTTC ACGATGCACT CAAAAAAGGA
AGTTATGCTT CTTTTTTAAA TGCTGCAACC GAATTGCCGA TGATGTATAT GGACGACGCG
ATCAGGGGGA CCATTGAATT GATGGATGCC GAGGCCGGCA AAATCTCAAT CCGTTCCAGT
TATAATTTTG CCGGTGTAAG CTTTACACCA GAGATTCTGG CTGCTGAGAT CAGGAAACAT
ATTCCGGACT TTAAACTAAC TTATACCGCC AATGATCCGC GCCAGCATAT TGCCGATGGC
TGGCCACGTT CTATTGATGA CAGCTATGCA GCCAGCGACT GGAACTGGAA GCCGGAATTT
GACCTCGCAA AACTGACAAC CGATATGTTG AAAAATTTAA AAAAATAA
 
Protein sequence
MMIEKILVLG SNGQIGTELV TALRKTYSED NVIACDIRRP DYDIKNSGPF EFVNVLEKET 
LNTIFQKYKP TQVYLLAALL SATGEQNPKL AWDLNMNGLL NILELAITYK TAKVYWPSSI
AVFGPNSPKD QTPQFCVMDP NTVYGISKLA GERWCEYYHQ KYGLDVRSIR YPGLISWKAA
PGGGTTDYAI HIFHDALKKG SYASFLNAAT ELPMMYMDDA IRGTIELMDA EAGKISIRSS
YNFAGVSFTP EILAAEIRKH IPDFKLTYTA NDPRQHIADG WPRSIDDSYA ASDWNWKPEF
DLAKLTTDML KNLKK