| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3642 |
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| Symbol | |
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| ID | 8254773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4355592 |
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| End bp | 4356320 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937303 |
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| Product | protein of unknown function DUF28 |
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| Protein accession | YP_003093895 |
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| Protein GI | 255533523 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGAG CATTTGAATT CAGAAAAGAA AGAAAATTTA AACGTTGGGC CAAAATGGCC
GTACAGTTTA CCAGGATAGG TAAGGATATT GTGATGGCAG TGAAAGAGGC CGGGCCACAT
CCTGAAACCA ATTCGCGCCT GCGTACGGCT ATACAAAATG CGAAAGCTGT AAACATGCCT
AAAGACCGTG TGGATGCCGC CATAAAAAGG GCTTCCGATA AAAGCATGGC CAACTATGAG
GAAATTGTTT ATGAAGGATA TGCTCCGCAT GGGGTGGCAG TACTGATAGA GACTGCTACT
GACAATACCA ACCGTACCGT TGCCAATGTG CGTAGTTATT TCAATAAAAC CAATGGTACT
TTAGGTAAAA CGGGTTCATT GGATTTTGTA TTCAACAGGA AATCTGTATT CAGGTTTGTG
CCTGCCGATG ACCTGGACCT GGAAGAACTG GAGTTTGAAT TGATTGATGC CGGATTGGAA
GAACTCTATG TAGAAGCTGA TGAAGAAGGT AACGATATTG CAGTTGCACA GGGCGCATTT
GAAAGTTTTG GATCCCTGCA AAAAGCACTG GAAGAGAAGG GCATAGAACT CAAAAGTTCC
AAGCTGGAAC GCATTGCCCT TTCACACCAT GAAGTGACCG AAGAACAGGC TGCTGATGTA
TTGAAGCTGA TCGATAAACT GGAAGAGGAC GATGATGTTC AGGCCGTTTA CCACAACATG
CCAGATTAA
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| Protein sequence | MGRAFEFRKE RKFKRWAKMA VQFTRIGKDI VMAVKEAGPH PETNSRLRTA IQNAKAVNMP
KDRVDAAIKR ASDKSMANYE EIVYEGYAPH GVAVLIETAT DNTNRTVANV RSYFNKTNGT
LGKTGSLDFV FNRKSVFRFV PADDLDLEEL EFELIDAGLE ELYVEADEEG NDIAVAQGAF
ESFGSLQKAL EEKGIELKSS KLERIALSHH EVTEEQAADV LKLIDKLEED DDVQAVYHNM
PD
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