Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3620 |
Symbol | |
ID | 8254751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4327968 |
End bp | 4328588 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644937281 |
Product | hypothetical protein |
Protein accession | YP_003093873 |
Protein GI | 255533501 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.675999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCAGT CCCGTAAAAA CTTTATCGTT TTTAATTTCT TTTCCTGGTA TATCAGGTAT ATCCTAAAAA AGGACTTTTC TGCTTATGTA TTCAATCCTT TTGAAGTAAA AAAGCAAAAA GCCGTTTTAC TGCTGGCCAA TCATTTCAGC TGGTGGGACG GTTTCTTAAT GTTTCAGCTC AACCGCTTGG TCTTTAAGAA AGAATTTCAT GTGCTGGTAA CCGAAGAGGA TTATGAAAAA TACTGGTTTT TAAAATACCT CGGTGCATTT GCTGCGGAAG GGAAGGGTAA GGATGTGGTC GAAACCCTGT TGTATGCAGG CAAGTTACTC GATGATCCGG CTAATATTGT ACTGATGTTC CCGCAGGGGA AATGTTATTC TGTTTACATA GACAGCATTG CTTTTGAGAA AGGGATAATG CAGGTGATAA ATGCTTCAAA AAAAGAATTT CAGATTGTCT TTGCCGCAAA CCTCGTAGAT CATACCTCAA GAAAACCTGG AGTTTATACT TACCTGTCCA GCTGGGAGGC AGAAGAACAC ACGAGCTTAC AGCTGTTAAA GAGCGAATAT AACAAACACT ACGAGCATTC CTTAAAAAAA CAAAGCAAGG CGCTGGTATG A
|
Protein sequence | MHQSRKNFIV FNFFSWYIRY ILKKDFSAYV FNPFEVKKQK AVLLLANHFS WWDGFLMFQL NRLVFKKEFH VLVTEEDYEK YWFLKYLGAF AAEGKGKDVV ETLLYAGKLL DDPANIVLMF PQGKCYSVYI DSIAFEKGIM QVINASKKEF QIVFAANLVD HTSRKPGVYT YLSSWEAEEH TSLQLLKSEY NKHYEHSLKK QSKALV
|
| |