Gene Phep_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3620 
Symbol 
ID8254751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4327968 
End bp4328588 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content40% 
IMG OID644937281 
Producthypothetical protein 
Protein accessionYP_003093873 
Protein GI255533501 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.675999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGT CCCGTAAAAA CTTTATCGTT TTTAATTTCT TTTCCTGGTA TATCAGGTAT 
ATCCTAAAAA AGGACTTTTC TGCTTATGTA TTCAATCCTT TTGAAGTAAA AAAGCAAAAA
GCCGTTTTAC TGCTGGCCAA TCATTTCAGC TGGTGGGACG GTTTCTTAAT GTTTCAGCTC
AACCGCTTGG TCTTTAAGAA AGAATTTCAT GTGCTGGTAA CCGAAGAGGA TTATGAAAAA
TACTGGTTTT TAAAATACCT CGGTGCATTT GCTGCGGAAG GGAAGGGTAA GGATGTGGTC
GAAACCCTGT TGTATGCAGG CAAGTTACTC GATGATCCGG CTAATATTGT ACTGATGTTC
CCGCAGGGGA AATGTTATTC TGTTTACATA GACAGCATTG CTTTTGAGAA AGGGATAATG
CAGGTGATAA ATGCTTCAAA AAAAGAATTT CAGATTGTCT TTGCCGCAAA CCTCGTAGAT
CATACCTCAA GAAAACCTGG AGTTTATACT TACCTGTCCA GCTGGGAGGC AGAAGAACAC
ACGAGCTTAC AGCTGTTAAA GAGCGAATAT AACAAACACT ACGAGCATTC CTTAAAAAAA
CAAAGCAAGG CGCTGGTATG A
 
Protein sequence
MHQSRKNFIV FNFFSWYIRY ILKKDFSAYV FNPFEVKKQK AVLLLANHFS WWDGFLMFQL 
NRLVFKKEFH VLVTEEDYEK YWFLKYLGAF AAEGKGKDVV ETLLYAGKLL DDPANIVLMF
PQGKCYSVYI DSIAFEKGIM QVINASKKEF QIVFAANLVD HTSRKPGVYT YLSSWEAEEH
TSLQLLKSEY NKHYEHSLKK QSKALV