| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3578 |
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| Symbol | |
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| ID | 8254700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4256163 |
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| End bp | 4257581 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937230 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003093831 |
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| Protein GI | 255533459 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.728117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATCCT GTACCAAGGA TTTGAACCTT GATCCCGTTA GTCAGATTTC AAATGCTTCT
TTCTGGAAAA CAGAAAATGA TGCCAACGGA GGATTGTATG GTATGTATGT AAGGTTTAGG
GGACAGGCGC AAAATAATCT TTTTTTATGG GGAGAAGCTA GAAGTGAGGT CATGAACCGT
AGTCTTGCCG CATTAAACGG ATACAATTAT TACTATGACA ATGCCTTGGA CAGAACCAAT
TCTGGTCCTA CCTGGCAGGG CATGTATACC GTTGTTCATG ATGCCAATTT GTTGCTGAAG
TATGTGCCTG GAATTAAATT CAGTTCTGAG GCCAGTAAGA ATGCCATTTT GGCGCAGGCA
TATACCATGC GCGCCTATGT GTATTTTACT ATGGTGAAAA CCTGGGGTGA TCTGCCCCTG
GTAACGGAAC CGATTGAGGG ATTTAGTGCC GATGCTATTC AGAAGGAAAG AACCTCGAAG
ATCGAGCTGT TTAAATTTAT AAAACAGGAT CTGGATGCAG CTTTAAATCT TTATTCAGCA
AACACGTTCA GTCCGGGCAG GAGCATCTGG TCAAAGCCGG CTGCAAATGC ACTAAAAGCG
GATGTTTATT TGTGGACAGC AAAGAGGGAG AATGGAGGCA GACCCGATCT AAACGTTGCC
TTAGCTGCAC TTAACGATGC ACAAGCCGGA GATGTTGGAT TGCTTGACAA TTATGCCAGC
ATATTTGATT ATGGAAATAA GGGGAATAGG GAAATTCTTA TGGCGGTGCG CTTTCAGGAT
GTTGAGGCAA CATCGACCAT TTTTTCAGAT ATGTACATGT CGAGCGCTTT TATGACCAAT
AATACAGACG CAGCAACTAA AGCTTTAATT GGTGCATTTG GGGGCAATCC TTACTGGACG
GTTTCCAATG GTGTAAGGGC ACAGTTTACT GCTGATGACT TACGCAAGCA ACCTTCGTTT
ATTGAAATTT ATACTACTAC AGGTACTTAT TATGGCTCTA TCGTTTATAA GTTTAAGGGA
ACGGTGATAG GAGGTGCCAG ACAATTTCTG GATGATGTGA TCTTGTACCG GTATGCGGAT
ATCCTGCTGA TGAAGGCTGA GGTAAAAAAT GCATTGGGGC AAGATCCGAG TGATGAGATC
AATCTGGTTA GGAAACGGGC TTATGGGGCC AAATACAATG ACCATTTTTT TGTCAGGGGA
ACTGATGTGC AAAACGATGA GGCCATCTTA AAAGAAAGGC TCTTGGAACT CGCATTTGAA
GGGAAGAGGT GGTGGGACCT TGTGAGGTTT GGAAAGGCAT TTGAAAAGAT TCCTTCACTT
GTGGATAGGG CCGGACAGAA TGATTTGCTG TTATTCCCCA TTTCGGAAAC TACTTTAAGC
CTGGAACCAA AAGTAAAACA AAACCCAGGT TATAAATAA
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| Protein sequence | MLSCTKDLNL DPVSQISNAS FWKTENDANG GLYGMYVRFR GQAQNNLFLW GEARSEVMNR
SLAALNGYNY YYDNALDRTN SGPTWQGMYT VVHDANLLLK YVPGIKFSSE ASKNAILAQA
YTMRAYVYFT MVKTWGDLPL VTEPIEGFSA DAIQKERTSK IELFKFIKQD LDAALNLYSA
NTFSPGRSIW SKPAANALKA DVYLWTAKRE NGGRPDLNVA LAALNDAQAG DVGLLDNYAS
IFDYGNKGNR EILMAVRFQD VEATSTIFSD MYMSSAFMTN NTDAATKALI GAFGGNPYWT
VSNGVRAQFT ADDLRKQPSF IEIYTTTGTY YGSIVYKFKG TVIGGARQFL DDVILYRYAD
ILLMKAEVKN ALGQDPSDEI NLVRKRAYGA KYNDHFFVRG TDVQNDEAIL KERLLELAFE
GKRWWDLVRF GKAFEKIPSL VDRAGQNDLL LFPISETTLS LEPKVKQNPG YK
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