| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3560 |
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| Symbol | |
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| ID | 8254681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4234105 |
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| End bp | 4238505 |
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| Gene Length | 4401 bp |
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| Protein Length | 1466 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644937211 |
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| Product | protein of unknown function DUF490 |
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| Protein accession | YP_003093813 |
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| Protein GI | 255533441 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.495594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGACCT ACGTGGCTAA AAAAGCTGCC GCTTATTTGT CAAAAGAACT GAATACAACC
ATCTCCTTAA GTGGCATTTA CATCAAACCT TTCAAATCTG TTGTGATTGA GGACCTGCTG
GTTCTTGATC AGCAAAAGGA TACTATACTC AACACACCAA AATTTCTGGT CGACATGAAC
CGGTTTTCTT TAAAAAACCG TATCATCGCC GTTAATACAA TACAAATTAA TAACGGCACT
TTCTACCTGA AATCATATAA AGACAGGTCT ACCAACCTTG ATTTCATTAT TGACTATTTT
GATTCGGGCC CACCCAATGT AAAAAAGAAA AAAAAGCCTT ACCAGATTTC CTTCGACAGG
ATTATCCTGA ACAACTTTGG TTTTAAGTAT AAAAACTACA GACAAAAGGA TACCGCTATG
AAAGGTATAA ACTTTGACGA TGTAGCCCTC AGTAATCTGA ATGGAATTTT CGAGAAGCTA
AATACAAAAG ATCATATCCT GCAAACCAAA ATAAAGGATC TTACCTTTAA AGAAAAAAGC
GGTTTCTATT TAAAAAACCT CACGGCATTT ACCACCATTG ATACCAATAG CATTGAACTA
AAGAAACTGT TGCTGGTAAC CAACAGAAGC CGGCTGTCTG ATTATTTTCA GATGCGCTTT
AAACGCTTTG CAGATTTTGA TGATTATATC AATAAGGTAA GGATGAATGC CAATTTTGTA
GATAGTCACA TTTCATCCCG TGATGTCTCT TTTTTTACTT CCGAACTGGA CCAGATGCAC
CTGGATATTG ATATAGATGG CCGAATTACC GGTTTGGTTA ATAATTTAAG GGCAAAAAAA
CTGGCTGTTA AGGCCGGAAA AGCTACCTAT ATTAAGGGCG ATTTTATGTT AAAGGGGCTG
CCTTATATCA AGGAAACTTT TATGGACCTG AAGATAGAGA TGGCCGGCAC AAATAAAACA
GACCTGGATG AGATCGTATC CAGTATTACC GGCAAAAATG GAACCGTTGT CCCAAAAGTG
GTCAATAAAT TTGGAAACAT CAATTTCAAT GGATCTTTTA CAGGCTTTAA AAACGATTTT
ATTGCTTATG GCGAATTCAA AACCCGCCTT GGCAGATTGG TGTCTGATGT AAACATGAAA
ATAGACAGGA AGGGAATCCC TTCTTATACA GGAAATGTTA AAACTTACGA TTTTGACATC
GGTACGCTGA TAGACGAAAA AACACTGGGC AGGCTCTCGG CCTCTTTATA TGTAAAAGGC
CGGGGTACAG AGGTCAACAG TCTTTCTGAA AAACTAAATG GAGATATCGA TTATATTGAT
TTTAACAGCT ACAGATATAG AAACGTTAAA ATAGATGGCA CTTTCGACAA GAAATATTTT
GATGGAAGAC TCACCATTAA CGATAAAAAT GTTCAGCTTG CTTTTGATGG CGGTGTTAAC
CTGAACCCAA AACTTCCAGT GTTCAACTTT AAAGCAACTA TAAAAAATGC CAAATTAAGG
GCACTCAAAT TATATAAGGA TTCTTTAAAA ATTGATGCTG TATTCAGTAC CAACTTTTCT
GGTAACAATC TGAACAACAT ACAGGGAAAT CTGAGGCTAC AGGAAATAAG ATTAGATAAT
GTTAAAGGGA TTTACAACAT AGATTCTGTA GAGCTGCAGG CTAGTGGACT GGGCAAAGAA
CGCAGTTTAA CCATAAAATC CGATATATTT GATGCCAGCA TTAAAGGTCA GTACGACTTA
AATACTATCC CATCCTATTA TAAAGCATTG GCTAAAAAGT ATATCCCATC TTTAAAAGCT
GATATTGTAA AGTATGGGGA TCAGATATTT CAGTTTAACC TCGTTATAAA AAGATTTGAA
CCTATTGCCG AATTACTGGT ACCCGGACTG GAAATTGAAG ATCAGGCCAT ATTGACCGGC
AATTTCGATT CTCCAAACAA TACTGCCACT TTAAATGGTT TTATCAAAAA ACTTAAGTAT
AAAGGGATAG TTGTAAACAA CATCATTATT GACGAAAATA CAAGTACGAA TCAGCTGCAG
GCTATTTTTA CCTCAGACAG GGTTGACCTG AACGACAGCC TGCATATTAA AAATGTAAAC
ATCTCCAATA TATTGCGGAA TGACAGCCTC TCCTTAAACG TTAAGCTTTC TAACGAGGAT
GATGTTAACC AACTGGATTT AAATGGATTG ATTGAATTTG CCAGTGATAC AACTGCACGC
ATAAGTATAC TTCCTTCTAT TTTGGTTGTC AACAACGAAG AATGGAAAAT CCAGGAAAAA
GTGAGGATAA ATTTTCATGA AGGAAAAACG GAGATCAGCA ATTTTGACCT TAACAATGGC
CGGCAGCTGC TTACTTTGGA TGGAACACTG TCAAGTGATC CTAAAGATCT GCTACTGGTA
GGTTTTAAAG ATTTTAGCCT GACTACATTA AATCCTTTTG TGAAAACACT TGGACTAAAA
TTGAGCGGAA ATGTAAACGG TGAAACAAAA TTAGCCAACA TTCTTAAATC GCCCGAAATT
CATGATAACC TTAAAATCGA TTCTCTGGTT TTTAATGACA CTTACATCGG GACCTTGACA
GACACGTCAT CGTATGACAA GGCTAAAAAT ACAGCCAATA TATACACCAA AATTGTGACT
ACAGACAGAG AAACTTTAAG GGCCACCGGA AATCTGGACC TTGAAAAAAA GGAAATTGAC
CTGAAAGTAA GGCTGGATAA AAGTGAGCTT GCTGTTTTTG AGCCCTTCAT TAATAACCTG
GTATCAGATC TGAAAGGTCA TGTCTCCTCT GATCTGACTG TGACCGGTCC TTTTGACAAA
CCATCAATTA AAGGAAGCCT TACACTGGAT GAGGCTGCCA TGACCATCAA TTACCTTAAA
ACAAGATATA CAATTTCTGA TGAGGTTGGG GTTAACAATA GTGTGATTGA CATTAACGAC
CTCAAATTGT TGGATACAGA TAATAATGAA GCGATAGCAA ATGGAACAGT GGATTTAAAT
GACATCAATA ACCCTACGCT TGATGTTGTT GTAAATGCCA CCAATTTCAT GGCCTTAAAC
ACGACCGAGA AAGATAATTC CCTCTATTTC GGAGAAGCTT ATGCCACTGG TACTTTTAAA
TTTAAAGGTC CGACAAATAA AATGTTTATT GACATTGATG CTAAAACAGA AAAGGGAACT
GTATTTAATT TACCCTTAAA TAGCTCTGAA ACTGTTTCAA GTAAAGACTT TATCACTTTT
ATAAGTAAAG ACACTGCCAG CTATGTAAAA AAACAGACCA GTTTTGATGG CCTGACCATG
AGCTTAAAAC TAAATGTAGA TGCCAATAGT ACTGCAAATA TTTTTACAAC ATTGGGTAAC
CTGAGTGGTA AAGGTTATTC AAAAAACCTG GCCCTTAAAA TCAATAGCTT CGGCGATTTT
GAAATGTCGG GCGACTATAT CATTGAAAGT GGCAGTTTTG ATTTTACAGC TCAGGAAGTC
ATTAATAAGA AGTTTACCAT CCGACAGGGG GGAACAATCA GGTGGACAGG AAACCCCTCT
GCTGCGCAGA TCAACTTAAA AGCTATTTAT GCACTCAGGG CGAGCACCAG CGATCTTTAT
GCGGCTGCCA ACAGAGAAAG CAGTAACGCC AATCAAAGGG TGCTTACTGA GGTTGAAATG
GGCCTTACCG GCCTGCTATT AAAACCTGAC ATTAAACTGG ATGTTTTTTT TCCTTCCAAT
CCTGCTATTA AAGAAGAAAT GCAGACGTAT TTTAATGATG ATAACAACCG GAACCTGCAG
GCCTTAAGTC TGATTATCAG ACGTAGTTTT GCGCCCGGAA GTGGAAAAGA AGACCTAGGC
AAACAGTTAA AATCCGGAGT AGCCAGTACG GCAACAGAAT TACTGTTTAA CCAGTTTAAC
AATGTACTTT CCTCACTGAA CCTGGATTTC GTAGACATCA ACATCCGTTC GTTGAGCGAG
GCCAATGCAT CCTTCAGGTT TTTTCAGGAC AGGATTGTTT TAAATGCAGG GATTGTAGAT
AAGAACAGCA CCAACGATCT GTCGCCAATT GGTTTTTCAA GAGACAATGT AGGTAGTGAA
GTTGAGGTGC TGGCACTGAT CAAGAAAGAT GGTACACTGG TAGGTAAGCT GGCCAATAAA
CCTCCAACAC AGCAAAGCAT TTTCAACACC GGCATACAAA ACACCAATGT AACCTCTTTG
GGTCTGATCT ATACCCAGCA ATTTGACAGC TTCAGGGAAT TTGTTCAAAA AATCTCAGGA
AAACTGCGCA GGGAAGAAAA ACAAAAGAAA CTGGAACTTG AAAAAAAGAC GGCAGAAGAG
GAAAAAAAAC CTTCTGCCGT CCAGCCTCCC CAAAATAAGG AGGGTATAAT AAATAATCAG
AAAAATCCTA AAAGGAAATA A
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| Protein sequence | MQTYVAKKAA AYLSKELNTT ISLSGIYIKP FKSVVIEDLL VLDQQKDTIL NTPKFLVDMN
RFSLKNRIIA VNTIQINNGT FYLKSYKDRS TNLDFIIDYF DSGPPNVKKK KKPYQISFDR
IILNNFGFKY KNYRQKDTAM KGINFDDVAL SNLNGIFEKL NTKDHILQTK IKDLTFKEKS
GFYLKNLTAF TTIDTNSIEL KKLLLVTNRS RLSDYFQMRF KRFADFDDYI NKVRMNANFV
DSHISSRDVS FFTSELDQMH LDIDIDGRIT GLVNNLRAKK LAVKAGKATY IKGDFMLKGL
PYIKETFMDL KIEMAGTNKT DLDEIVSSIT GKNGTVVPKV VNKFGNINFN GSFTGFKNDF
IAYGEFKTRL GRLVSDVNMK IDRKGIPSYT GNVKTYDFDI GTLIDEKTLG RLSASLYVKG
RGTEVNSLSE KLNGDIDYID FNSYRYRNVK IDGTFDKKYF DGRLTINDKN VQLAFDGGVN
LNPKLPVFNF KATIKNAKLR ALKLYKDSLK IDAVFSTNFS GNNLNNIQGN LRLQEIRLDN
VKGIYNIDSV ELQASGLGKE RSLTIKSDIF DASIKGQYDL NTIPSYYKAL AKKYIPSLKA
DIVKYGDQIF QFNLVIKRFE PIAELLVPGL EIEDQAILTG NFDSPNNTAT LNGFIKKLKY
KGIVVNNIII DENTSTNQLQ AIFTSDRVDL NDSLHIKNVN ISNILRNDSL SLNVKLSNED
DVNQLDLNGL IEFASDTTAR ISILPSILVV NNEEWKIQEK VRINFHEGKT EISNFDLNNG
RQLLTLDGTL SSDPKDLLLV GFKDFSLTTL NPFVKTLGLK LSGNVNGETK LANILKSPEI
HDNLKIDSLV FNDTYIGTLT DTSSYDKAKN TANIYTKIVT TDRETLRATG NLDLEKKEID
LKVRLDKSEL AVFEPFINNL VSDLKGHVSS DLTVTGPFDK PSIKGSLTLD EAAMTINYLK
TRYTISDEVG VNNSVIDIND LKLLDTDNNE AIANGTVDLN DINNPTLDVV VNATNFMALN
TTEKDNSLYF GEAYATGTFK FKGPTNKMFI DIDAKTEKGT VFNLPLNSSE TVSSKDFITF
ISKDTASYVK KQTSFDGLTM SLKLNVDANS TANIFTTLGN LSGKGYSKNL ALKINSFGDF
EMSGDYIIES GSFDFTAQEV INKKFTIRQG GTIRWTGNPS AAQINLKAIY ALRASTSDLY
AAANRESSNA NQRVLTEVEM GLTGLLLKPD IKLDVFFPSN PAIKEEMQTY FNDDNNRNLQ
ALSLIIRRSF APGSGKEDLG KQLKSGVAST ATELLFNQFN NVLSSLNLDF VDINIRSLSE
ANASFRFFQD RIVLNAGIVD KNSTNDLSPI GFSRDNVGSE VEVLALIKKD GTLVGKLANK
PPTQQSIFNT GIQNTNVTSL GLIYTQQFDS FREFVQKISG KLRREEKQKK LELEKKTAEE
EKKPSAVQPP QNKEGIINNQ KNPKRK
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