| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3500 |
|---|
| Symbol | |
|---|
| ID | 8254620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4167482 |
|---|
| End bp | 4168213 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644937150 |
|---|
| Product | stationary-phase survival protein SurE |
|---|
| Protein accession | YP_003093753 |
|---|
| Protein GI | 255533381 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC TGATTACAAA TGATGACGGC ATATACAGCC CGGGAATTGC CGCACTTGCA
AAAATTGCGC TGAGGTTTGG CGAAGTAAGG ATAGTGGCTC CTGATGTAGA GCAATCGTCC
ATGGGCCATG CCATCACCCA TTCCAGGCCA TTATCCATAA AAAAATCACC TATAGCATTT
GAAGGTATGG AGGCTTACCG GGTAAATGGT ACGCCTGCCG ACTGTGCTGC CTTAGGCTTA
CACATTTATC CGGATACCGA TGTGGTGTTG TCTGGTATAA ATATGGGGCC AAACCTTGGC
AATTCTATGT GGCACTCCGG TACACTGGCA GCAGCCAAAC AGGCCGTTTT ACTGGGCGTG
AAGGGAGTTG CCCTGAGTAC TCCGGTAGGG AAAACCGAGC CGGATTTTGA AGGGCTGGGC
AAGTATGTAG AACAGGCACT GGCAGAGTTG CTGAATACTA CTGCTCTTGG TTTATACAAT
GTGAACTTTC CGCCCAAGCC TATTGGGATC AGGTGGACAA AACAATCTGT CCGGCTTTAT
GATGGCAAGG TGGTGCCAGG AATAGATCCC ATGCAAAGAA AGCATTACTG GATCACTGTA
TCGCCACTGG CAGCGGCAGA AGAAGGAACT GACAGATGGG CTGTTGAAAA TGGCTTTGTT
TCCATTACGC CTTTGCGGCT TGACCTGACC AATGAGATTG AACTGGTGCA GCATTTAGCT
GTTGCAAAGT AA
|
|---|
| Protein sequence | MKILITNDDG IYSPGIAALA KIALRFGEVR IVAPDVEQSS MGHAITHSRP LSIKKSPIAF
EGMEAYRVNG TPADCAALGL HIYPDTDVVL SGINMGPNLG NSMWHSGTLA AAKQAVLLGV
KGVALSTPVG KTEPDFEGLG KYVEQALAEL LNTTALGLYN VNFPPKPIGI RWTKQSVRLY
DGKVVPGIDP MQRKHYWITV SPLAAAEEGT DRWAVENGFV SITPLRLDLT NEIELVQHLA
VAK
|
|---|
| |