Gene Phep_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3452 
Symbol 
ID8254572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4105084 
End bp4105905 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content42% 
IMG OID644937104 
Producthypothetical protein 
Protein accessionYP_003093707 
Protein GI255533335 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.281711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0529388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATAA AAGAGCTTTT TTCAATAAGT GGCGCAGCCC AAAAAACCAT TTACGGCGAT 
TGTACTTATG ACGATAAAAA CACAAATCAG GACACTATAA TTTTTATCCA TGGCTTTAAA
GGCTTTAAAG ACTGGGGGGC GCATAACCTC GTTGCTTCTT TTTTTGCCTC AAAAGGCTAC
AGATATGTCA AATTTAACCT GTCGCACAGT GGCGTTACCG CACAAAATCA ATACGATGTA
ACGGACATGG AAACTTTTGC TGCCAATACG ATCAGCAAAG AACTGACCGA TGTTAATGCA
GTAATTGATT ATGTTGCGGC TACCTGGCCA ACTGCTGCCA TCAGTCTGAT AGGGCACAGC
AGGGGTGGTG GACTGGCCAT TATACAGGCT GCAAAAGATA CCCGCATCCA TAAACTCATT
ACCTGGTCGG CCATTTCCGA TTTCTCCAGT CTCTGGAAAA AAGAACAGGA AAAGGAATGG
GCAGCAACCG GACAAATTTT TGTAGAGAAT GCCAGGACAA AAGAAAAAAT GCCATTAAAC
AACACCCTGC TTGATGATTT TAATCAAAAC AAAGAAAAGG TCGACATCAT AAGAGCAGCA
AAAAAAATAC ATATCCCCTG GCTTATTCTT CATGGTGATG AAGATGTAAA CGTGAAATTT
AGTGTTGCCC AACAACTGGC ACAAAAGCAG CTTAAGGCAA AAATACAAAA AATTCAAGGC
GCAAACCATG TTTATGGGGC TTCCCATCCT TATGCTGCCA ATCAGCTACC AATGCATTTG
CAGGAAGTTG CAGAAAAGAC CCTGGCCTTT ATCAGTGCTT AG
 
Protein sequence
MIIKELFSIS GAAQKTIYGD CTYDDKNTNQ DTIIFIHGFK GFKDWGAHNL VASFFASKGY 
RYVKFNLSHS GVTAQNQYDV TDMETFAANT ISKELTDVNA VIDYVAATWP TAAISLIGHS
RGGGLAIIQA AKDTRIHKLI TWSAISDFSS LWKKEQEKEW AATGQIFVEN ARTKEKMPLN
NTLLDDFNQN KEKVDIIRAA KKIHIPWLIL HGDEDVNVKF SVAQQLAQKQ LKAKIQKIQG
ANHVYGASHP YAANQLPMHL QEVAEKTLAF ISA