Gene Phep_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3443 
Symbol 
ID8254563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4095983 
End bp4096531 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content41% 
IMG OID644937095 
Producthypothetical protein 
Protein accessionYP_003093698 
Protein GI255533326 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.879523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAT ACTACTATTA CGTCCTTTCT GTTCATATCA TCTTTATGGT AAGCTGGATG 
GCGGGGTTGT TTTATAGTGT ACGTTTGTTC ATTTACCATA CCGAGGCCAA CGACAGGTCC
GAAATGGAGA AAGCCATTCT CCAAAAAGAG TATGAAAAAA TGGAGCGCAA GCTCTGGTAC
ATCATCACTA CACCGGCCAT GGTATTAACA GTGCTGGCCG GTATCACCAT GCTTTGCATC
AGACCAGCAT TGCTGCAAAT GCCCTGGATG CATGTAAAAC TTAGCTTTGT AGTTTTACTG
CTCATTTACC ACTTTATTTG TCAGCGTATC ATGAAACAGC TAAAGCTGGG TACCTGTAAA
ATGAGTTCCT TTAAGCTGCG TTTGTGGAAT GAAGTGGCCA CCATTTTACT GGTCGCCATT
GTATTTACAG TGATCTTAAA AAATGCTGTA GACTGGATAT ACGGCCTCAT TGGTCTGATC
ATTTTTGCTG TGGTTATCAT GGCTGCAGTA AAATGGTATA AACATTACCG GAAAAAACAC
GATTCCTAA
 
Protein sequence
MDKYYYYVLS VHIIFMVSWM AGLFYSVRLF IYHTEANDRS EMEKAILQKE YEKMERKLWY 
IITTPAMVLT VLAGITMLCI RPALLQMPWM HVKLSFVVLL LIYHFICQRI MKQLKLGTCK
MSSFKLRLWN EVATILLVAI VFTVILKNAV DWIYGLIGLI IFAVVIMAAV KWYKHYRKKH
DS