Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3443 |
Symbol | |
ID | 8254563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4095983 |
End bp | 4096531 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644937095 |
Product | hypothetical protein |
Protein accession | YP_003093698 |
Protein GI | 255533326 |
COG category | [S] Function unknown |
COG ID | [COG1981] Predicted membrane protein |
TIGRFAM ID | [TIGR00701] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.879523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAAAT ACTACTATTA CGTCCTTTCT GTTCATATCA TCTTTATGGT AAGCTGGATG GCGGGGTTGT TTTATAGTGT ACGTTTGTTC ATTTACCATA CCGAGGCCAA CGACAGGTCC GAAATGGAGA AAGCCATTCT CCAAAAAGAG TATGAAAAAA TGGAGCGCAA GCTCTGGTAC ATCATCACTA CACCGGCCAT GGTATTAACA GTGCTGGCCG GTATCACCAT GCTTTGCATC AGACCAGCAT TGCTGCAAAT GCCCTGGATG CATGTAAAAC TTAGCTTTGT AGTTTTACTG CTCATTTACC ACTTTATTTG TCAGCGTATC ATGAAACAGC TAAAGCTGGG TACCTGTAAA ATGAGTTCCT TTAAGCTGCG TTTGTGGAAT GAAGTGGCCA CCATTTTACT GGTCGCCATT GTATTTACAG TGATCTTAAA AAATGCTGTA GACTGGATAT ACGGCCTCAT TGGTCTGATC ATTTTTGCTG TGGTTATCAT GGCTGCAGTA AAATGGTATA AACATTACCG GAAAAAACAC GATTCCTAA
|
Protein sequence | MDKYYYYVLS VHIIFMVSWM AGLFYSVRLF IYHTEANDRS EMEKAILQKE YEKMERKLWY IITTPAMVLT VLAGITMLCI RPALLQMPWM HVKLSFVVLL LIYHFICQRI MKQLKLGTCK MSSFKLRLWN EVATILLVAI VFTVILKNAV DWIYGLIGLI IFAVVIMAAV KWYKHYRKKH DS
|
| |