| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3429 |
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| Symbol | |
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| ID | 8254549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4084238 |
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| End bp | 4085482 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644937082 |
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| Product | threonine dehydratase |
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| Protein accession | YP_003093685 |
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| Protein GI | 255533313 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR02079] threonine dehydratase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACT TTAGCCCACT CGATTCCGAA GCTGCTTCAA AACGGCTGAA CAACATCGTA
AAACGTACGC CCCTCATTTA TAACGCCAAA TTATCTGAAA AATATGAAGC AGAAATTTAC
CTGAAGCGTG AAGACCTGCA GGTAGTACGC TCGTACAAAT TGCGAGGGGC CTATAACATG
ATCAGCCAGC TGAGCACAGC GCAGCTGAAC AGGGGAATTG TATGTGCAAG TGCCGGAAAC
CATGCTCAGG GCGTTGCTTT TTCCTGTGAT AAACTGGGTA CTAAGGGTGT CATTTTTATG
CCCGAAATTA CACCGCGGCA AAAAGTAAAG CAAACAGAGA TGTTTGGCAA TGGCCAGGTA
GAACTGGTAT TGGTTGGTGA TACTTTTGAT GATTGCCTTA GGGAAGCCCT GGCCTATACC
GCAGCCCATA ACATGACCTT TATCCCTCCT TTCGACAATT ACAGTATCAT TGAGGGTCAG
GGCACAGTTG GTGTGGAAAT ACTGCAGGAC CTGCCCGGTG CCGATGTGGT TATTATGCCC
GTAGGTGGTG GCGGGCTTGC TGCCGGTGCC GGCACTTATC TTAAAAGCAA AAATCCGCAC
ATTGTATTGC TGGGTGCAGA GCCTGAAGGT GCCCCCTCCA TGTCTGAAGC CCTTACACAG
GGCGCGCCGG TTACCTTAGC AGCCATTGAA CGTTTTGTGG ACGGTGCGGC AGTAAAACGC
GTTGGCGAGC TGACTTATGA ACTGTGTGCC AGGGTGCTGG ATGATATGCA GCTGGTTGCC
GAAGGAAAGG TTTGTACCAC GATATTAAAA TTATACAATG AGGATGCCAT TGTAGTGGAG
CCTGCAGGTG CTTTATCGGT AGCCGCACTG GATGCTTATG CAGATAAAAT CAAAGGCAAA
AAGGTAGTGT GTGTCATCAG TGGCGGCAAC AACGATATTG AACGCATGCA GGAGATCAAA
GAGAAATCTT TGCTGTACGA AGGGCTGAAA CATTACTTCA TTGTCCGTTT TCCGCAAAGG
CCGGGTGCAC TGAAGTTATT TGTGAACAAT GTGCTGGGCC CGCATGATGA CATTACCCGC
TTCGAGTTCA TCAAAAAAAC AAACCGGGAA AACGGCCCGG CACTGGTTGG TATAGAGCTG
GCCAATAAAG CTGATTATAA TGCCCTGGTA CAGCGTATGA AGGAATTTAA GTTTGAAATT
ATTGAACTGA ACAACGACCA GACCTTGTTT GAATACCTGG TTTAG
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| Protein sequence | MTDFSPLDSE AASKRLNNIV KRTPLIYNAK LSEKYEAEIY LKREDLQVVR SYKLRGAYNM
ISQLSTAQLN RGIVCASAGN HAQGVAFSCD KLGTKGVIFM PEITPRQKVK QTEMFGNGQV
ELVLVGDTFD DCLREALAYT AAHNMTFIPP FDNYSIIEGQ GTVGVEILQD LPGADVVIMP
VGGGGLAAGA GTYLKSKNPH IVLLGAEPEG APSMSEALTQ GAPVTLAAIE RFVDGAAVKR
VGELTYELCA RVLDDMQLVA EGKVCTTILK LYNEDAIVVE PAGALSVAAL DAYADKIKGK
KVVCVISGGN NDIERMQEIK EKSLLYEGLK HYFIVRFPQR PGALKLFVNN VLGPHDDITR
FEFIKKTNRE NGPALVGIEL ANKADYNALV QRMKEFKFEI IELNNDQTLF EYLV
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