| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3426 |
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| Symbol | |
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| ID | 8254546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4080885 |
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| End bp | 4081481 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937079 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_003093682 |
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| Protein GI | 255533310 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.278995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTACG ATAAATTTAA TGTATTAAGA AGCACCGCGG TTCCGCTTCC GATAGAAAAT
ATAGATACCG ATCAGCTGAT CCCCGCACGT TTTTTAAAAG CAACGGAACG TGTTGGGTTT
GGCGACAACC TTTTCCGCGA CTGGAGGTAC AATCCAGACA ATACCCCGAA AAAAGACTTT
GTGCTGAACA ACCCTGTTTA CAGCGGCAAA ATATTGGTTG GCGGTAAGAA CTTTGGTTCA
GGATCATCCA GGGAACACGC AGCCTGGGCA GTATACGACT ATGGTTTCAG ATGTGTAATA
TCCAGTTTTT TTGCTGACAT TTTTAAGAAT AACTGTCTGA ATATTGGGGT ATTGCCTGTG
CAGGTAAGTG CTGAATTTGC AGATAAAATT TTTACGGCAA TTCATGCCGA TCCGAACACG
GAACTGGAAG TGAACTTGCC TGAGCAGACC GTTACCCTGC TGGCTACAGG TGAAAAAGAA
ACTTTCGAGA TCAGTCCCTA TAAAAAAGAC AACATGATGA ATGGCTTTGA CGACATCGAT
TATCTGCAAA GCATCAAACC GGAAATAGAG GAATTTGCTT TACATCTTCC ACTTTAA
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| Protein sequence | MAYDKFNVLR STAVPLPIEN IDTDQLIPAR FLKATERVGF GDNLFRDWRY NPDNTPKKDF
VLNNPVYSGK ILVGGKNFGS GSSREHAAWA VYDYGFRCVI SSFFADIFKN NCLNIGVLPV
QVSAEFADKI FTAIHADPNT ELEVNLPEQT VTLLATGEKE TFEISPYKKD NMMNGFDDID
YLQSIKPEIE EFALHLPL
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