| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3403 |
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| Symbol | |
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| ID | 8254522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4050670 |
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| End bp | 4051743 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937055 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003093659 |
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| Protein GI | 255533287 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000194853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TACCGTTTTT CCTGGCTTTG ATCTGGCTTT TAATGGTAAC CTGCGGCAAA
AAAAATGTGC CGCAGGAACC GCAACCAACT GGAACTGGTC CCAGCGCCAA CCCAGTACAA
TACAGAAACC CTGTATTTGA ACCAATACTT GCAGATCCAA GCATCATAAA AGGTACAGAT
GGCTGGTATT ATGGTTATGG AACAGAAGAT GATTGGGGCG ATGGAAAGGG AAACAGGCTC
GTACCGGTTG TACGTTCACT CGATCTGGTG AGATGGTCCC TGGTTGGAAA TGCTTTCACG
GCAAAACCTG TATGGAAAGC CGAAGGCGGT TTATGGGCAG TAGATGTGGT GCGGGTAAAC
AACCTGTACC ATATGTACTA TTCTTTCTCG CTTTGGGCAG ACCGCAATCC TGCCATTGGG
CTGGCTGTGG CCAATTCACC TGCAGGGCCA TTTGTAGACA AAGGAAAACT TTTTTTTAGT
GAGGAGATAG GGGTGCCTGT CTCGATTGAT CCGCATTACT ACGAAGAAAA TGGCAAAAAG
TATCTATTTT TCGGTAGTTA TAGCTCACAA ACCGTTCAGG GAACGTATGC AGTAGAGCTA
ACTGCAGATG GCTACGCCGT AAAAGACATC AATCAAAAAA CAAATATTGC TGCCGGGGAT
TTTGAAGCCG TAATGATTCA CAAAAGAGGC AACTACTATT ATTTTTTTGG CTCAAAAGGC
AGCTGCTGCG ATGGGGCTGC CAGCACTTAT AACGTCAGGG TCGCACGATC AGAAAATCTG
CTTGGCCCTT ACTTGGATCA AGCAGGTAAA AACATTGTGC AGCGAGGAAA TGGTACGCTG
ATCTTGCAGG GCAATTCCAA GTTTGCAGGT CCGGGACACA ATGCTAAAAT CATTACCGAC
AAAAACGGGA CGGACTGGCT CTTCTACCAT GCTATAGATA AAATGAACCC TAAGGTATCC
AGCGGTGCAA GCAGAAGAAT GCTGATGCTC GATAAGCTCA GTTGGGTAGA GGGATGGCCT
GTAATCGCCA ATGGGGTTCC GAGCGGCGAC ATCCAGGCTG GCCCTGAATT ATAA
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| Protein sequence | MKTIPFFLAL IWLLMVTCGK KNVPQEPQPT GTGPSANPVQ YRNPVFEPIL ADPSIIKGTD
GWYYGYGTED DWGDGKGNRL VPVVRSLDLV RWSLVGNAFT AKPVWKAEGG LWAVDVVRVN
NLYHMYYSFS LWADRNPAIG LAVANSPAGP FVDKGKLFFS EEIGVPVSID PHYYEENGKK
YLFFGSYSSQ TVQGTYAVEL TADGYAVKDI NQKTNIAAGD FEAVMIHKRG NYYYFFGSKG
SCCDGAASTY NVRVARSENL LGPYLDQAGK NIVQRGNGTL ILQGNSKFAG PGHNAKIITD
KNGTDWLFYH AIDKMNPKVS SGASRRMLML DKLSWVEGWP VIANGVPSGD IQAGPEL
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