Gene Phep_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3398 
Symbol 
ID8254517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4041796 
End bp4043448 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content47% 
IMG OID644937050 
Producthypothetical protein 
Protein accessionYP_003093654 
Protein GI255533282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.634058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG TGCGCATTTT ATCCTTTCTG CTGCTAAGCG GCACGCTATT GGGCTCCTCC 
ATATCCGTAC AATCCCAAAC CGTCTATCAG GCAGGGACTG CCGCAGCGAG CCTGGAACCC
AAAAGTTCAC CATTTTCGCT CGCACTGGCA GGATATGGGC TGCCCAGGGG AGGGCGGTTT
AACATTAAAT GGCAGGAATC TGCTTTATCA CTTTCACATT TTAAAGCTAA AAAGCTGGGC
AACAAGTGGA AAAGCCTGGT TGATGCCAAT CGCTTTCCTC CGGGAACCCT TAGTGTGATC
AGCTATAAAG AACGGTTGAT GGCGCTGACC GCCGAAGATG AACTGTATCG CCTGGATGCT
TCAGACCCGA CTGCAGAATG GATCCGCTTT GCAAATTTTA ATAATGTGTT TTACAGGGTT
CATTTAAAAG CGATCACGGT ACATAAAAAC CAGCTCTATG GTCTGGGTAA AGACAATAAA
ATATATCGCG CGGTACAGCA AACCGAGGGC GACTTAACCG TTAAGGCGGT AGCCATTGGC
GAAGGAGATC AATCGGTGGT CATGGTCGGC ACTGACCTTT GCGGCTTTAA TACCAGTTTT
ATTACGTCAA TCAAACAAGA GGTTTACAAA AAGCACAACA TCCGGCCGGA GGCAGTACTC
ATCAATGCCT CCCATACCCA TTTTGCACCT TCCACCCAGG ATTGGACCAC ATGGGGCAGC
CATCAATTGC CGGATACTTT GTACCTGAAC GGTGTGGTCA GACCAGCAGT CTTAAAAGCA
ATAAGTCAGG CCCTCAAAAA CAGAAGGTCA TCTTTGCTTT CTTTCGGCAG GGGAAGTACA
GCAATAGGCC ATAACCGGAC CCTGAAAGGG CCAGATGCAC CTTATGACAA TGCCCTAGAC
GTGCTTCAGA TAGAAAATAC TGCCGACCAT ACCAAATCGA TAGTATTCCT CACCGGCTGT
CACCCTGTAT TCAGCAATTT GGGTGAAGAG GGTTTTACCC TCAGTGCCAA TTATCCGGGT
GAAGCCAGAA AAGTATTGGA AAAGGAGGCA GGTATTAAAG AAGCCATCTT TATCCAGGGA
TGCGGTGGCG ATATTAATCC AGTACAAGCA AACCACAACA AAACGGGAAG CGACCTCGCA
GCAGATGTTA AAACCATTCT CCAACAGCCG ATGCAGCAGT TGAGCGGGAA GATCGACTTT
CACCTGGATT CAGTTAATTT TCCGGTCAAC AGATGGAGCA GGGAACAAAT CCTGGCTTTT
GGAAAGGAAA ATGGCAACTC ACCGAATGAT GTATATGCAG AAAAGAATGT GCGATGGGCC
AATTTGATGG CTAAGCTGGA CAGCCAAGAT AAAATGCCGC AAACCATGCC GGTCTACATG
CAGACTTTCA ATATTGGCAA CTGGAAACTG GTAGGTATTT CAAGGGAAAC GGTAACCGAC
TACAGTATCG GGATCAAAAA ATTGTGGCCC GGAAAGCTGG TCAGTGTGGC TGGTTATTGC
AATGATGTTT CCAGTTACCT TCCCACCTCC AAACACATCA ATGCCGGAGT ATACGAAGGT
AAAGACTCTT TTTTCTGGTA TGGACAGCCC GCTGTGTTCC CTTTAAACCT GTACGAAACA
ATTATAGACC GCATTAAATC CAAAAATTAT TAA
 
Protein sequence
MKKVRILSFL LLSGTLLGSS ISVQSQTVYQ AGTAAASLEP KSSPFSLALA GYGLPRGGRF 
NIKWQESALS LSHFKAKKLG NKWKSLVDAN RFPPGTLSVI SYKERLMALT AEDELYRLDA
SDPTAEWIRF ANFNNVFYRV HLKAITVHKN QLYGLGKDNK IYRAVQQTEG DLTVKAVAIG
EGDQSVVMVG TDLCGFNTSF ITSIKQEVYK KHNIRPEAVL INASHTHFAP STQDWTTWGS
HQLPDTLYLN GVVRPAVLKA ISQALKNRRS SLLSFGRGST AIGHNRTLKG PDAPYDNALD
VLQIENTADH TKSIVFLTGC HPVFSNLGEE GFTLSANYPG EARKVLEKEA GIKEAIFIQG
CGGDINPVQA NHNKTGSDLA ADVKTILQQP MQQLSGKIDF HLDSVNFPVN RWSREQILAF
GKENGNSPND VYAEKNVRWA NLMAKLDSQD KMPQTMPVYM QTFNIGNWKL VGISRETVTD
YSIGIKKLWP GKLVSVAGYC NDVSSYLPTS KHINAGVYEG KDSFFWYGQP AVFPLNLYET
IIDRIKSKNY