Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3398 |
Symbol | |
ID | 8254517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4041796 |
End bp | 4043448 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644937050 |
Product | hypothetical protein |
Protein accession | YP_003093654 |
Protein GI | 255533282 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.634058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAG TGCGCATTTT ATCCTTTCTG CTGCTAAGCG GCACGCTATT GGGCTCCTCC ATATCCGTAC AATCCCAAAC CGTCTATCAG GCAGGGACTG CCGCAGCGAG CCTGGAACCC AAAAGTTCAC CATTTTCGCT CGCACTGGCA GGATATGGGC TGCCCAGGGG AGGGCGGTTT AACATTAAAT GGCAGGAATC TGCTTTATCA CTTTCACATT TTAAAGCTAA AAAGCTGGGC AACAAGTGGA AAAGCCTGGT TGATGCCAAT CGCTTTCCTC CGGGAACCCT TAGTGTGATC AGCTATAAAG AACGGTTGAT GGCGCTGACC GCCGAAGATG AACTGTATCG CCTGGATGCT TCAGACCCGA CTGCAGAATG GATCCGCTTT GCAAATTTTA ATAATGTGTT TTACAGGGTT CATTTAAAAG CGATCACGGT ACATAAAAAC CAGCTCTATG GTCTGGGTAA AGACAATAAA ATATATCGCG CGGTACAGCA AACCGAGGGC GACTTAACCG TTAAGGCGGT AGCCATTGGC GAAGGAGATC AATCGGTGGT CATGGTCGGC ACTGACCTTT GCGGCTTTAA TACCAGTTTT ATTACGTCAA TCAAACAAGA GGTTTACAAA AAGCACAACA TCCGGCCGGA GGCAGTACTC ATCAATGCCT CCCATACCCA TTTTGCACCT TCCACCCAGG ATTGGACCAC ATGGGGCAGC CATCAATTGC CGGATACTTT GTACCTGAAC GGTGTGGTCA GACCAGCAGT CTTAAAAGCA ATAAGTCAGG CCCTCAAAAA CAGAAGGTCA TCTTTGCTTT CTTTCGGCAG GGGAAGTACA GCAATAGGCC ATAACCGGAC CCTGAAAGGG CCAGATGCAC CTTATGACAA TGCCCTAGAC GTGCTTCAGA TAGAAAATAC TGCCGACCAT ACCAAATCGA TAGTATTCCT CACCGGCTGT CACCCTGTAT TCAGCAATTT GGGTGAAGAG GGTTTTACCC TCAGTGCCAA TTATCCGGGT GAAGCCAGAA AAGTATTGGA AAAGGAGGCA GGTATTAAAG AAGCCATCTT TATCCAGGGA TGCGGTGGCG ATATTAATCC AGTACAAGCA AACCACAACA AAACGGGAAG CGACCTCGCA GCAGATGTTA AAACCATTCT CCAACAGCCG ATGCAGCAGT TGAGCGGGAA GATCGACTTT CACCTGGATT CAGTTAATTT TCCGGTCAAC AGATGGAGCA GGGAACAAAT CCTGGCTTTT GGAAAGGAAA ATGGCAACTC ACCGAATGAT GTATATGCAG AAAAGAATGT GCGATGGGCC AATTTGATGG CTAAGCTGGA CAGCCAAGAT AAAATGCCGC AAACCATGCC GGTCTACATG CAGACTTTCA ATATTGGCAA CTGGAAACTG GTAGGTATTT CAAGGGAAAC GGTAACCGAC TACAGTATCG GGATCAAAAA ATTGTGGCCC GGAAAGCTGG TCAGTGTGGC TGGTTATTGC AATGATGTTT CCAGTTACCT TCCCACCTCC AAACACATCA ATGCCGGAGT ATACGAAGGT AAAGACTCTT TTTTCTGGTA TGGACAGCCC GCTGTGTTCC CTTTAAACCT GTACGAAACA ATTATAGACC GCATTAAATC CAAAAATTAT TAA
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Protein sequence | MKKVRILSFL LLSGTLLGSS ISVQSQTVYQ AGTAAASLEP KSSPFSLALA GYGLPRGGRF NIKWQESALS LSHFKAKKLG NKWKSLVDAN RFPPGTLSVI SYKERLMALT AEDELYRLDA SDPTAEWIRF ANFNNVFYRV HLKAITVHKN QLYGLGKDNK IYRAVQQTEG DLTVKAVAIG EGDQSVVMVG TDLCGFNTSF ITSIKQEVYK KHNIRPEAVL INASHTHFAP STQDWTTWGS HQLPDTLYLN GVVRPAVLKA ISQALKNRRS SLLSFGRGST AIGHNRTLKG PDAPYDNALD VLQIENTADH TKSIVFLTGC HPVFSNLGEE GFTLSANYPG EARKVLEKEA GIKEAIFIQG CGGDINPVQA NHNKTGSDLA ADVKTILQQP MQQLSGKIDF HLDSVNFPVN RWSREQILAF GKENGNSPND VYAEKNVRWA NLMAKLDSQD KMPQTMPVYM QTFNIGNWKL VGISRETVTD YSIGIKKLWP GKLVSVAGYC NDVSSYLPTS KHINAGVYEG KDSFFWYGQP AVFPLNLYET IIDRIKSKNY
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