| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3346 |
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| Symbol | |
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| ID | 8254465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3968696 |
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| End bp | 3969868 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936998 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003093602 |
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| Protein GI | 255533230 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.605498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0983986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATAT CCACTTACAC CACAGAAGCC ATTTCCAATA CCGCATTAGC TTACCGTTCC
AGGATCAACA GATCAACCCA AATCATTTAC CTGATTACCG TTCTTACTAT CCTGATTACC
CTTGCGCTCC TCCCTTTCAT CAAAACATCC ATCAGTGTAA AAAGTGCCGG AATACTACAA
TCATCAATTG AAAAAACAGA ACTTACTGTA CCTGCCAACG GACGTGTGAT CACCCTTAAA
TTACAGGACA ACCAAAAAAT TAAACAGGGC GAAACTTTAT TGGTCATTGA TGCCGCACTG
GCCAAACAAC AGGGCAATAT TGTACAAAAC CGCCAGGCCC AGTTATCAGC CTTTCTGCAG
GACATCCATC TACTGCTCGT TTACATCAAC AGAAACGGCT ACAGTTACCC ACCCCTGCAA
ACGGGGCAAT ACACGGCTTC CTGGCAACAG TTTGCCCAGG AACTGGAAAG TGCCAGAATA
GCCAAAACAC AAGCCGAAAA CACTTTTAGC CGATACAACA GGCTCTTTCA GAACAAGGCC
ATCACCGAAT CTGAATACGA ACATTATAAA TTTGAACTGC AACAAGCCGA ATCAGCCCTT
AAAATGATCT GCAGCAAATA CAGATCGCAA TGGCAAACAG AAGCCAGCTC CCTGCGCAAC
GAACTGCAAC AGCTAAGCGG CCAGCAGGTA GAACTGAACG AACAAAAAAA ATTATACACT
TTAAAAGCCC CGGTAGATGG CTCCGTTCAG AACCTGACGG GCATAAAAGA AGGAGCTTAT
GTGTTTGCAA ACCAAAAAAT AGGTGAAATC TCTCCCAATG CAGATCTTAC AGCATTTTGT
TACGTTAAAC CATCAGATAT AGGGCTGATT AAAGTGGGCC AGGAGGTACG CTTCCAGATT
GATGCTTACA ATTATAATCA ATGGGGACTG GCCAAAGGTA CAGTACTCGA CATCTCGGAT
GATATCATAG TCATCAACAA CGATCAGCCG GTATTTAAAG TAAAATGCGC ACTCAGCCAA
AACCACCTGC TGTTAAAAAA TGGCTATAAA GGGTATTTAA AAAAAGGAAT GAGCTTTACC
GCACGTTTCA CAGTAACAGA ACGCAGCTTG TACCAGTTGC TGTATGATAA AATAGATGAC
TGGGTAAACC CCAACCTGAA TGCTAAGCTA TAA
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| Protein sequence | MSISTYTTEA ISNTALAYRS RINRSTQIIY LITVLTILIT LALLPFIKTS ISVKSAGILQ
SSIEKTELTV PANGRVITLK LQDNQKIKQG ETLLVIDAAL AKQQGNIVQN RQAQLSAFLQ
DIHLLLVYIN RNGYSYPPLQ TGQYTASWQQ FAQELESARI AKTQAENTFS RYNRLFQNKA
ITESEYEHYK FELQQAESAL KMICSKYRSQ WQTEASSLRN ELQQLSGQQV ELNEQKKLYT
LKAPVDGSVQ NLTGIKEGAY VFANQKIGEI SPNADLTAFC YVKPSDIGLI KVGQEVRFQI
DAYNYNQWGL AKGTVLDISD DIIVINNDQP VFKVKCALSQ NHLLLKNGYK GYLKKGMSFT
ARFTVTERSL YQLLYDKIDD WVNPNLNAKL
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