| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3308 |
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| Symbol | |
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| ID | 8254427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3921111 |
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| End bp | 3923021 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936960 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_003093564 |
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| Protein GI | 255533192 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0744248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCAG TGCTTGTCCA TAGCTTATTC AGTGATTTTG ATATTTCTTT ATTTGTTTCA
GGGAAGCACT TTAGGTTGTA TGAGAAATTT GGAGCGCAGC TGATCCATGT TGAGGGGGTA
GCGGGTACTT ACTTTGCGGT TTGGGCGCCC AATGCCCAGG CTGTACATGT AATTGGCGAT
TTTAACCAAT GGAACCGGTC GGCCCATGCT TTAAACAAAC GCCTGGATTC ATCTGGCATA
TGGGAAGGTT TTATCCCTGG TATAGGCAAG GGTGAGCTTT ATAAGTTTTT AGTAAAAGGT
TTTGACGGGC TGGAAGTAGA AAAAGGCGAT CCTTATGCCA AAAGATGGGA ACATCCGCCA
AAAACAGCTT CTATTGTTTG GGACAATGAT TACAAATGGA AAGATAAAGC CTGGTTAAAT
AAGCGCCCTA AATTAAATGC ACTGAACAAG CCCATGTCGG TTTATGAGGT ACATCTGGGA
TCCTGGCAGC GTGATCCGAG TGAACCTGAT CGGGTGCTGA CCTATATGGA AATTGCCAAT
AGCCTTGTTC CTTATGTGCT GGATATGGGT TTTACGCATG TCGAGTTCAT GCCTTTAATG
GAATATCCCT ACTTCCCATC CTGGGGATAC CAGATTACCG GATATTTTGC AGCAAGTTCG
CGGCATGGTA CTCCTCAGGA ACTGATGTAC CTGATCAATG AACTGCATAG AAATAACATT
GCTGTAATTA TGGATTGGGT GCCTTCTCAT TTTCCAGGTG ATTCGAATGG CCTTTACCAT
TTTGATGGTA CGCATTTGTA CGAACATTCG GATATGCGCA AAGGTTTTCA TCCCGACTGG
AAATCCTATA TTTTTAATTA CGACAGGAAC GAAGTGCGTT CATTCTTAAT CAGCAATGCA
CTGTACTGGC TGGATAAATT CCATATAGAT GGGTTAAGGG TTGATGCCGT AGCTTCTATG
CTTTATTTCG ACTTTTCCCG CAAAACAGAG GATGCTGCCA AAAATGAATA TGGGGGCAGT
GAAAACCTGG GGGCTATCCA GTTTTTAAAA GACCTTAACA TTGCGGTATA TGGTAATTAC
GAAGGGGTAC ATACCATTGC CGAAGAAAGC AGTACTTACC CCCTCGTAAC ACATCCGGTA
CACAATGGTG GCCTTGGTTT TGGGATGAAA TGGATGATGG GCTGGATGAA CGATACGCTG
AAATATTTCA AAAATGATCC GATCAACAGA AGGTACCATC ATTATCAGCT TACTTTCAGC
ATTACATACG CTTTTACAGA AAACTTTATG CTTCCGTTTT CTCATGATGA AGTGGTACAC
GGCAAGTCAT CCATGATTTA TAAAATGCCT GGCGATGAGT GGCAGAAGTT TGCCAATTTA
AGGGTATTGT ATGCCTATAT GTTTACCCAA CCTGGTACAA AGCTCTTGTT TATGGGGAAT
GAATTTGCGC AGACCCATGA ATGGGATTTT AAAAGTTCGC TGGACTGGCA CTTACTGGAA
CACGCACCTC ATATTGGTAT GCAAAAAACC GTAAGGGCAA TCAATAAATT ATATGTTTCT
GAGCCGGCCC TATTTGAGCA TAGCTTTTCT GCTGAAGGTT TTGAATGGAT CAATGCGGAT
GATGCCAGGC ATTCTATTTA CATCTACATC AGAAAAGGCA AAAAGGCAAA AGATACCTTA
ATTGTAATTT TGAACCTGAC ACCTGTTTAC AGAGAAAATT ATAGAGTTGG CCTACCATTC
AGAGCCAAAT GGAAGGAAAT ATTTAATACA GATGCCAAAG AGTTTTTTGG CAGTGGAAAG
CTGAACAATA AACTGATACT TCCTGAAAAA GTAGGTTGCC ACAACAGGGA CTACTCGGTT
GTATTGAATG TTCCACCCCT GGCGGTTACC ATACTTAAAC AAGGCGTTTA G
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| Protein sequence | MRAVLVHSLF SDFDISLFVS GKHFRLYEKF GAQLIHVEGV AGTYFAVWAP NAQAVHVIGD
FNQWNRSAHA LNKRLDSSGI WEGFIPGIGK GELYKFLVKG FDGLEVEKGD PYAKRWEHPP
KTASIVWDND YKWKDKAWLN KRPKLNALNK PMSVYEVHLG SWQRDPSEPD RVLTYMEIAN
SLVPYVLDMG FTHVEFMPLM EYPYFPSWGY QITGYFAASS RHGTPQELMY LINELHRNNI
AVIMDWVPSH FPGDSNGLYH FDGTHLYEHS DMRKGFHPDW KSYIFNYDRN EVRSFLISNA
LYWLDKFHID GLRVDAVASM LYFDFSRKTE DAAKNEYGGS ENLGAIQFLK DLNIAVYGNY
EGVHTIAEES STYPLVTHPV HNGGLGFGMK WMMGWMNDTL KYFKNDPINR RYHHYQLTFS
ITYAFTENFM LPFSHDEVVH GKSSMIYKMP GDEWQKFANL RVLYAYMFTQ PGTKLLFMGN
EFAQTHEWDF KSSLDWHLLE HAPHIGMQKT VRAINKLYVS EPALFEHSFS AEGFEWINAD
DARHSIYIYI RKGKKAKDTL IVILNLTPVY RENYRVGLPF RAKWKEIFNT DAKEFFGSGK
LNNKLILPEK VGCHNRDYSV VLNVPPLAVT ILKQGV
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