Gene Phep_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3298 
Symbol 
ID8254417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3909801 
End bp3910265 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID644936950 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_003093554 
Protein GI255533182 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.458049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTG AAGAATTTAT CAAGTCCTTA GGACTTGGAA TGGCATTGTT ATGCACCGGA 
TCCTGCATCT CCGGTTGTGG TGGAAAAGGT GATACTGGTA CTCCAGACCC AGGAACCCCT
CCGGGAGGTG GTGGTGGAAA TGGCAATACA GCTACTGTTG ATCTGGCTAC ACAGTTAATG
GCTATTGGCG ATCAGGCTAC GGCAAATGGC GTACTCTTTT TTAGGATTGC AGCTGGTAGT
GCTCCTGCAT CATTTGTAGC AACGGAATCT ATTTGTCCGC ATCAGGGGGG AAGTCTGGTA
TGGAAGCAAA GCGACAATAA AATACAATGT CAGCTGCACT TTTCTGAATA CAGTACGAAT
GGAACTGTTC TTCAGGGCCC TCAGGGTACT ACAGGTAATA CAAGGACACT TAAAATTTAC
GCCACAGCAA TAAGCGGAAC CAAACTAACT GCAACCATAG TGTAA
 
Protein sequence
MEREEFIKSL GLGMALLCTG SCISGCGGKG DTGTPDPGTP PGGGGGNGNT ATVDLATQLM 
AIGDQATANG VLFFRIAAGS APASFVATES ICPHQGGSLV WKQSDNKIQC QLHFSEYSTN
GTVLQGPQGT TGNTRTLKIY ATAISGTKLT ATIV