| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3288 |
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| Symbol | |
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| ID | 8254407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3899985 |
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| End bp | 3900569 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936940 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_003093544 |
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| Protein GI | 255533172 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.211802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTACGG GAATAATAGA AACATTAGGA GTAGTTAAAA ATATTAAAAC TGAAGGTACC
AATCTTCATT TTACCATACA ATCTGCCATC AGTAACCAGC TAAAAATAGA CCAGAGTGTA
GCCCATAACG GAGTCTGTTT AACTGTAGTG GCCTTAACAG ATGATACCCA TACGGTAACA
GCCATACAGG AGACACTGGA AAAATCCAAT ATGCAGTACC TCAAAATAGG AAATAAGGTT
AACCTGGAGC GTTGCATGCA AATGAATGGC CGGCTGGACG GACATATAGT TCAGGGGCAT
GTAGACCAGA CAGCTACCTG TATCAAAAGA GAAAAACTGG ATGGCAGTTG GGAATACCGT
TTTAAATACG ATGCCGCTAA TGGCAATGTT ACCGTTGAAA AAGGTTCGGT ATGCCTCAAT
GGCATCAGTT TAACTGTGGT TGGCTCTGCA GCTGATGAAT TTTCAGTATT TATAATTCCC
TATACCTTTG AACATACCAA TTTACAGGAA GTCGAAGTTG GTGATGCCGT AAATGTAGAG
TTTGACATTA TCGGTAAGTA TGTGGCCCGG TTGGTCAACA GGTGA
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| Protein sequence | MFTGIIETLG VVKNIKTEGT NLHFTIQSAI SNQLKIDQSV AHNGVCLTVV ALTDDTHTVT
AIQETLEKSN MQYLKIGNKV NLERCMQMNG RLDGHIVQGH VDQTATCIKR EKLDGSWEYR
FKYDAANGNV TVEKGSVCLN GISLTVVGSA ADEFSVFIIP YTFEHTNLQE VEVGDAVNVE
FDIIGKYVAR LVNR
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