Gene Phep_3284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3284 
Symbol 
ID8254403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3895918 
End bp3896505 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content43% 
IMG OID644936936 
Producthypothetical protein 
Protein accessionYP_003093540 
Protein GI255533168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.268547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAATCTTATC CGCATTGTTT ATCTCTTTAA ACCTGGCAGC ATTTAGTCAG 
GTATTGCCTA GTTTCCAGCT GGGGCTGAAG GCAGGAGCCA ACCTTTCTAA ACTCAGTACC
GATAATACTT TTAGCAGCGA CAACCGGGCC GGTTATTATG CAGGTATATG GACCCGTATC
GGCGCTGCAG GAATTCATTT ACAACCTGAG CTCTATTTAA GCGGAAAAAA TACAACATTA
AAAGATGCCA GCGGGCAGGA AAACAAAGTG AAATTTACCA GTCTTGATGT ACCTGTACTG
GTAGGAACAA AATTGGGTGC CGCAGGAGTT GGCCTGAGGT TAAACACGGG GCCTGTGGTT
TCTTTTATCC TAGATGATGA GCAGTCATTC GGGCAGGCCG CTGGAAGTGT ATTTAAAGGC
AATTTTAAAG GACAGAATTT TGCATGGCAG TTTGGTGCAG GTGTAGATGT CGGAAAATTA
GGTCTTGATC TCAGATATGA AACCGGACTT TCCAAAATTG GAAAAGATGG CTATAACGAT
ACTAAATTGA GCCTTTTTAC TTTCGGACTG GCTTACAGAC TGTTCTAG
 
Protein sequence
MKKIILSALF ISLNLAAFSQ VLPSFQLGLK AGANLSKLST DNTFSSDNRA GYYAGIWTRI 
GAAGIHLQPE LYLSGKNTTL KDASGQENKV KFTSLDVPVL VGTKLGAAGV GLRLNTGPVV
SFILDDEQSF GQAAGSVFKG NFKGQNFAWQ FGAGVDVGKL GLDLRYETGL SKIGKDGYND
TKLSLFTFGL AYRLF