Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3240 |
Symbol | |
ID | 8254359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3845925 |
End bp | 3846749 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644936893 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003093497 |
Protein GI | 255533125 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0478294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAA AATTCATAAC GATTGCCAAT TGTAAACTAG CCTATCTTGA AAAAAACAGC ACTGCTCAAA ACACCATCTT TTTTATCCAT GGAAACTCGG TTTCTTCCCG TTCCTGGAAG GCACAGTTGA GCAGTGAAAG GTTACAGGGA TACAGGTTAA TTGCTATAGA TTTACCTGCA CATGGTGATT CTGGAGCTTC AGCTGATCCG GGTGCAGATT ACAGCATACC AGGTTTGGGG GCAATTGTGG CTGCTGCCAT TAAAGTCTTA GCTGCAGATC GTCCTTACAT TTTGGTTGCT TTATCGCTGG GAACGAATAT AATGGCTGAA TCTCTGGCCT TCGGTCTCCA TCCTGCGGGA ATTGTACTTG CAGGAAGCTG CCTTATCGGA GAAAAATATA CGCTCGACAG TTTTGTTTAT CCTGATACAA ATGTTGCAGT AGTTTTTACA GAACAAGCTC CGCAAAACGA AGTCAGGTTA TATGCTTCAC AGGTGATGAG CAACAGTGAT GCATCGGTAG TGGAAGAATT TGTGACAGAT TATTATCAGG TAAAGTTGCC CTTCAGATCA TCATTGAGCG GCAGTATCCA GGAACAAAAA TACAACGATC AGATTGCATT GATCCATGCA GTTGACAAAC CTGCATTGGT CATTTTTGGA AAAGACGAAC AGGTTATAAA TCCCGATTAT TTAGATGATG CACCATTTAA ACTATGGCAG AACACCGTTT TTAAGATTCC CGGAGCCAGC CACCTGGTAC AGTCCGATCG CCCGGAAGAA TTCAATAAAT TACTGGCTGA TTATGCAGCC GAGACTTTCA TTTAA
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Protein sequence | MTQKFITIAN CKLAYLEKNS TAQNTIFFIH GNSVSSRSWK AQLSSERLQG YRLIAIDLPA HGDSGASADP GADYSIPGLG AIVAAAIKVL AADRPYILVA LSLGTNIMAE SLAFGLHPAG IVLAGSCLIG EKYTLDSFVY PDTNVAVVFT EQAPQNEVRL YASQVMSNSD ASVVEEFVTD YYQVKLPFRS SLSGSIQEQK YNDQIALIHA VDKPALVIFG KDEQVINPDY LDDAPFKLWQ NTVFKIPGAS HLVQSDRPEE FNKLLADYAA ETFI
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