Gene Phep_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3240 
Symbol 
ID8254359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3845925 
End bp3846749 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content42% 
IMG OID644936893 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003093497 
Protein GI255533125 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0478294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAA AATTCATAAC GATTGCCAAT TGTAAACTAG CCTATCTTGA AAAAAACAGC 
ACTGCTCAAA ACACCATCTT TTTTATCCAT GGAAACTCGG TTTCTTCCCG TTCCTGGAAG
GCACAGTTGA GCAGTGAAAG GTTACAGGGA TACAGGTTAA TTGCTATAGA TTTACCTGCA
CATGGTGATT CTGGAGCTTC AGCTGATCCG GGTGCAGATT ACAGCATACC AGGTTTGGGG
GCAATTGTGG CTGCTGCCAT TAAAGTCTTA GCTGCAGATC GTCCTTACAT TTTGGTTGCT
TTATCGCTGG GAACGAATAT AATGGCTGAA TCTCTGGCCT TCGGTCTCCA TCCTGCGGGA
ATTGTACTTG CAGGAAGCTG CCTTATCGGA GAAAAATATA CGCTCGACAG TTTTGTTTAT
CCTGATACAA ATGTTGCAGT AGTTTTTACA GAACAAGCTC CGCAAAACGA AGTCAGGTTA
TATGCTTCAC AGGTGATGAG CAACAGTGAT GCATCGGTAG TGGAAGAATT TGTGACAGAT
TATTATCAGG TAAAGTTGCC CTTCAGATCA TCATTGAGCG GCAGTATCCA GGAACAAAAA
TACAACGATC AGATTGCATT GATCCATGCA GTTGACAAAC CTGCATTGGT CATTTTTGGA
AAAGACGAAC AGGTTATAAA TCCCGATTAT TTAGATGATG CACCATTTAA ACTATGGCAG
AACACCGTTT TTAAGATTCC CGGAGCCAGC CACCTGGTAC AGTCCGATCG CCCGGAAGAA
TTCAATAAAT TACTGGCTGA TTATGCAGCC GAGACTTTCA TTTAA
 
Protein sequence
MTQKFITIAN CKLAYLEKNS TAQNTIFFIH GNSVSSRSWK AQLSSERLQG YRLIAIDLPA 
HGDSGASADP GADYSIPGLG AIVAAAIKVL AADRPYILVA LSLGTNIMAE SLAFGLHPAG
IVLAGSCLIG EKYTLDSFVY PDTNVAVVFT EQAPQNEVRL YASQVMSNSD ASVVEEFVTD
YYQVKLPFRS SLSGSIQEQK YNDQIALIHA VDKPALVIFG KDEQVINPDY LDDAPFKLWQ
NTVFKIPGAS HLVQSDRPEE FNKLLADYAA ETFI