| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3235 |
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| Symbol | |
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| ID | 8254354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3841018 |
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| End bp | 3842142 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936888 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_003093492 |
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| Protein GI | 255533120 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0867918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTA TTGTATCCAC ATCAACGCTT TTAAAACATT TGCAAACAGT TAATGGTGCA
TCAAGCAGCA GTACTGTTTT GCCTATACTG GAAAATTTCC TGTTTGAGAT TAAAGATGGA
AATTTAACGA TATCTGCTAC CGATCTGCAA ACCAGCATGA CCACTTCTTT GCCTGTAGAA
TCCAAAGAAG GAGGTAAAGT TGCGGTTCCT GCAAGAATAT TACTTGACAC CTTAAAAACA
CTGCCCGATC AGCCAATTTC TTTCAATATT GACGATAGTA CTTTCTCTAT CGAGATCAGC
GCGGGCGACG GTAAATACAA ATTGAGCGGA GAGAACGGGG ATGATTTTCC TAAAATCCCG
GTTGTTGAAA ATGCTTCATC TGTAAACCTG CCAGCTTCTG TTTTAACTGA GGCCATTACC
AAAACAATTT TTGCTGTCAG CAGCGATGAA CTTCGGCCGG CTATGACGGG TGTTTTTTGT
CAGCTTTCTG ATCAGCACAT CACTTTTGTA GCTACAGACG CACACAAGTT GGTAAGATAC
AGGCGTATGG ACAGTAAAGC AGATAAAAGT TCTTCTTTTA TTTTGCCTAA AAAAGCCCTA
ACCCTGCTAA AGGCGGCTTT GCCTTCTACT GACATCAACG TATCTGTAGA TTACAATGCA
ACCAGCGCTT TCTTTAAATT TGAGAACATT AATCTGGTTT GCCGTTTGAT TGACGAGCGC
TATCCTGATT ATGAGGCGGT TATTCCTGCC AACAATCCAA ATAAACTGGT TATAGACAGG
GCTTTGTTCC TGAATACCCT ACGCAGGGTG GTTATTTTTG CAAACAAAAC CACGCATCAG
GTGAGGTTAA AGATCAATGG CAGCGAATTA AATATCTCTT CTGAAGACCT TGATTTTGCC
AATGAAGCAC ATGAGCGTTT GAGTTGCCAG TATGAGGGTG AAGATCTGGA AATTGGCTTT
AATGCTAAGT TTTTAATAGA GATGCTGAGC AATTTAAGCG GCGAAGAGGT GACATTAGAG
CTATCTACAC CAAACCGGGC CGGCTTGCTG ATCCCTCAGA CCAATGATGA GAACGAGGAC
GTCCTGATGC TGGTGATGCC GGTTATGTTA AACAATTACA ATTAA
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| Protein sequence | MRFIVSTSTL LKHLQTVNGA SSSSTVLPIL ENFLFEIKDG NLTISATDLQ TSMTTSLPVE
SKEGGKVAVP ARILLDTLKT LPDQPISFNI DDSTFSIEIS AGDGKYKLSG ENGDDFPKIP
VVENASSVNL PASVLTEAIT KTIFAVSSDE LRPAMTGVFC QLSDQHITFV ATDAHKLVRY
RRMDSKADKS SSFILPKKAL TLLKAALPST DINVSVDYNA TSAFFKFENI NLVCRLIDER
YPDYEAVIPA NNPNKLVIDR ALFLNTLRRV VIFANKTTHQ VRLKINGSEL NISSEDLDFA
NEAHERLSCQ YEGEDLEIGF NAKFLIEMLS NLSGEEVTLE LSTPNRAGLL IPQTNDENED
VLMLVMPVML NNYN
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