| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3228 |
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| Symbol | |
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| ID | 8254347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3832753 |
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| End bp | 3834087 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936881 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003093485 |
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| Protein GI | 255533113 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.157836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.116835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA AATTCGAGGA CTTTAACCTT AACCGACAGA TCTTAAATGC TGTAGCTGAT
GCCGGGTTTA CCGAGGCTAC ACCCATACAG GAAAAAGCAA TTGCACCCGT ATTGTCCGGA
CAGGATATTT TTGGCATTGC CCAAACCGGT ACCGGTAAAA CAGCCGCTTA TGTATTGCCC
ATTTTGATGC AGCTGAAATA TGCACAGGGC GATGCCGCAC GTGCGCTGAT CCTGGCCCCG
ACAAGGGAGC TGGCCATGCA GATTGCGGAG CATGTGAAAA TGTTTGCTGC TTATACCGAT
CTGCGTTCGG TAGTGATATT TGGCGGTATA GGCCCTAAAA CACAAATCGA GCAGATCAAA
GCTGGCGTAG ATATTATCAT TGCTACGCCG GGCAGGTTCC TGGATATTTA TCTGGCGGGG
CACATCAACA CACAGTATTT AAAATTCCTG GTATTGGACG AGGCCGATAA AATGATGGAT
ATGGGCTTTA TTGGTTCCAT ACACCGCATT TTGGAAGTGG TGCCCCGTAA AAGGCAAAAC
CTGCTTTTCT CGGCTACCAT GAGTAACCTG GTGCAGAAGA TAGCGGGCGA TTTTTTAAAG
AACCCCACCA TTATAGAGGT AGCAGAACAA GCCACCCCGG CAGCAACTGT TACCCAAACA
TTGTATGAGG TACCCAACTT TAAGACCAAA ATCAACCTGT TGCAGCACCT GATGAAAAAT
GATGAGGAAT TTAAGCGCCT GATCATTTTT TGCAAGACCA AAACTGTGGC CGATAATATT
TATAGTTTTA TTACACGCCG TTTTGGGGAG GATGCGGTAA GGGTAATTCA TGCCAATAAG
GGACAGAACA CGCGCATCAA CTCTATCAAT AATTTTAAGG AAGGCAATAT CAGGGTATTG
GTGGCAACGG ATGTAGCTTC GAGGGGGATT GATGTTTCGG AGGTTAGCCA CGTGATCAAC
TTTGACGTAC CGATCATCAT TGAAGATTAT GTACACCGCA TTGGCCGTAC GGGCAGGGCG
TATGCTAAAG GCGATGCCCT TACTTTTTGC AGTCCGGCCG AGAAATATTA CATTCAGAAA
ATAGAAAAAC TGATCAGACA ACAGATTCCT GTTGTACCTT TGCCCCCTGA AGTTTTTGTG
GAAGAAACAC CTTATGATGA AAAGCAGGCC ATTGCCCGTG CAATTGACGA CCAGAAACGT
AAGGATGATC CGGATTTTAA AGGTGCGTTT CACGAGAAAA AACATGCTGC CGCTATAGCT
GCAGCTGCAA GAGAAAAAAA CAGGGACAAA ACACCTGCAT GGAAGAAAAA GAAGTTCAAA
AAGAAAAGAA TGTAA
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| Protein sequence | MAKKFEDFNL NRQILNAVAD AGFTEATPIQ EKAIAPVLSG QDIFGIAQTG TGKTAAYVLP
ILMQLKYAQG DAARALILAP TRELAMQIAE HVKMFAAYTD LRSVVIFGGI GPKTQIEQIK
AGVDIIIATP GRFLDIYLAG HINTQYLKFL VLDEADKMMD MGFIGSIHRI LEVVPRKRQN
LLFSATMSNL VQKIAGDFLK NPTIIEVAEQ ATPAATVTQT LYEVPNFKTK INLLQHLMKN
DEEFKRLIIF CKTKTVADNI YSFITRRFGE DAVRVIHANK GQNTRINSIN NFKEGNIRVL
VATDVASRGI DVSEVSHVIN FDVPIIIEDY VHRIGRTGRA YAKGDALTFC SPAEKYYIQK
IEKLIRQQIP VVPLPPEVFV EETPYDEKQA IARAIDDQKR KDDPDFKGAF HEKKHAAAIA
AAAREKNRDK TPAWKKKKFK KKRM
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