Gene Phep_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3223 
Symbol 
ID8254342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3829722 
End bp3831110 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content44% 
IMG OID644936876 
Producthypothetical protein 
Protein accessionYP_003093480 
Protein GI255533108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.682465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.039169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGC GAATCTTTAC TTTTATACTA TGTCTGTTTA CCTTTGGTAT TGCTACTGCT 
GGCTTTGCAG GTACAATTAC TGTTTCTTCT TTGCCGGAAT TGCAGGCGGC TATAGATAAA
TCGGCAGCAG GTGACGTAAT CCTGCTTAAA AATGGTGTTT ATACCAGTAC AAACGATATT
GTTGTGAGAA AAAAGGGTAC AGCAGCGAAG CCCATTACCA TTGCAGCAGA AAGCATTGGC
GGAGCAGAAA TTACGGGTGC AGGGGGGATA AAAATAGCAG GCCCATCGGC TTATATTGTC
ATACGTGGTT TTAAATTTAC CCATTTGTCC GGCAAGGCCG AAACCGGCGA GGGTTCCAGT
TTTTGCCGCT GGACCAGGAA TATTTTTGAA ACTACCGGAG AGGGAAATTA CCTGACCGTT
TTTGGCAGCG ACCAGCAGAT TGATCACAAC ACCTTTCAAA ATAAAAATGC TTTAGGGAAA
TTTATTGGGG TGAGGGGTAC AGGTAAACAG ATTGCGGAGC GTTTGTGGAT CCACCACAAT
TACTTTCATA ATTTTTCGCA GCAGCGGGGC AATGGTGCCG AGGCTGTACA ATTTGGTCTT
AGTGGATTTA GTCTTTCTTC CAGCAACAGC ATTTTTGAAT ATAATTTATT TGAAAACTGC
GAGGGCGAGA ACGAACTTTT ATCCGTTAAA TCGTCGGCCA TAACCGTACG TTACAATACC
ATTCGCGATT GCAAGGCACA GCTTACCCTG CGCCATGGAA ATTTTAACCA GGTATATGGC
AATTATTTTA ACAATACACC CGGTATCAGG ATTTTTGGCG ATGACCATAT CATTTACAGC
AATTATTTCG AAAACTGCAA TTCGGCCATT AACATTGGCA ACGGTGGGGC AGAGGTAGCT
GATGGGGCAC CTTTAACTTC CCACGACAGG CCAGACAGGG TTTTAATTGT CTTCAACACA
CTGATCAATA ACAAAAGTAA CATCACTTTA AATCCGAGAA GCCCGATAGG CCTGGGGGCA
ACCGCTGTTA CCATTGCCAA TAACCTAATA CAGGGGGGCG ATGAAGCAGC TGTGATCAGG
GGGCCATATG TTAATTCTAA ATGGGAAGGT AATGTGATTT TTAATGTTAA GGGGCCGGGC
AATATCCCGG AAGGTGCTTA CAGGACAATT GACCCTAAGC TGCAGCGTGA TGCAACAGGT
ACTTACCACC TTTCTGCCGC AAGTCAGACT TTAAAGGCTA CAGGTAATTA TCCGGCAATT
GCCTTTGATA TGGATGGACA GCCTTGTAAA ATGCCTTTAC AGGTTGGGGC CGATCAGCCA
TCAACAGTGC CAGTTAAAGC AAAAATTTTA ACACCAGCTA TGGTTGGGCA TACTGCAGAC
CTGAAATAG
 
Protein sequence
MMKRIFTFIL CLFTFGIATA GFAGTITVSS LPELQAAIDK SAAGDVILLK NGVYTSTNDI 
VVRKKGTAAK PITIAAESIG GAEITGAGGI KIAGPSAYIV IRGFKFTHLS GKAETGEGSS
FCRWTRNIFE TTGEGNYLTV FGSDQQIDHN TFQNKNALGK FIGVRGTGKQ IAERLWIHHN
YFHNFSQQRG NGAEAVQFGL SGFSLSSSNS IFEYNLFENC EGENELLSVK SSAITVRYNT
IRDCKAQLTL RHGNFNQVYG NYFNNTPGIR IFGDDHIIYS NYFENCNSAI NIGNGGAEVA
DGAPLTSHDR PDRVLIVFNT LINNKSNITL NPRSPIGLGA TAVTIANNLI QGGDEAAVIR
GPYVNSKWEG NVIFNVKGPG NIPEGAYRTI DPKLQRDATG TYHLSAASQT LKATGNYPAI
AFDMDGQPCK MPLQVGADQP STVPVKAKIL TPAMVGHTAD LK