| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3221 |
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| Symbol | |
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| ID | 8254340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3828231 |
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| End bp | 3828890 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644936874 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_003093478 |
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| Protein GI | 255533106 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.119543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAAC TTTGGTGGAA GATATTAGGG TCAGTATTAG TTTTATATAC TACCATTGCC
GGACTACTTT TGGGTGTACC CCGTTTAGCC ATATTAAATG AGACCATACG TAACCTGTAT
TTTCATGTAC CTATGTGGTT TGCCATGCTT ACCTTGTTTT CTATTTCTGT TTATTACAGT
ATAAAGTATT TATTGAGTGA AAATGAATCT GATGATCTGC GTGCTGTAGA AAGTGTAAAT
GTAGGCATCG TTTTTAGTAT ACTTGGCCTG GTTACCGGTG CTTTCTGGGC CAGATTTACC
TGGGGACAGT TCTGGAGCTT TGATGTAAAG CAAAATTTTA CAGCTATAGC GATACTTTTG
TACTTTGCTT ACCTGGTATT GAGAAATTCC ATTGATGAAC AGCAGAAACG CGCAAAAATT
TCAGCCATAT ACAATATTTT TGCTTTTCCA ATGATGGTAG TTCTGATTAT GGTATTGCCG
CGTTTGTCTG ATTCATTGCA TCCGGGAAAC GGAGGGAACC CCGGGTTTAA CAGTTACGAT
CTGGACAGTC GCATGCGGGT TGTTTTGTAT CCTGCATTTA TTGGCTGGTC AATAATCGGT
TACTGGATCT ATACCATCAG ATTTAGGATC AGAACAATAG AAAATAAACA AAACTCATAA
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| Protein sequence | MNKLWWKILG SVLVLYTTIA GLLLGVPRLA ILNETIRNLY FHVPMWFAML TLFSISVYYS
IKYLLSENES DDLRAVESVN VGIVFSILGL VTGAFWARFT WGQFWSFDVK QNFTAIAILL
YFAYLVLRNS IDEQQKRAKI SAIYNIFAFP MMVVLIMVLP RLSDSLHPGN GGNPGFNSYD
LDSRMRVVLY PAFIGWSIIG YWIYTIRFRI RTIENKQNS
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