Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3216 |
Symbol | |
ID | 8254335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3822526 |
End bp | 3823284 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644936869 |
Product | oxidoreductase domain protein |
Protein accession | YP_003093473 |
Protein GI | 255533101 |
COG category | [S] Function unknown |
COG ID | [COG5495] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0684452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTG TTTGTATAGG TTCAGGTAAT GTTGGCACGC ACATGGCCAA TGCCTTTAAA GAAAATGAAG CTGATATTGT TCAGGTATGG AGCAAAGATC CCGCGAATGC AGCTGCTTTG GCCTTTGAAA CAGGTGCACA GGCCATTGCT GATCTGGAGG ATATAGACCT GAATGCCGAT CTGTACCTGA TTGCAGTAAA AGACGATGCC ATTGCAAAGT TAGTTAGGGC TCTTAAAGCC GTAAATGGCC TGGTAGTCCA TACTTCGGGT GCTACCGATA TGAATGTATT ATCGGGTATT AAAAATTATG GCGTTTTTTA TCCTTTGCAA ACTTTCTCTA AAGAAGAACC GATAGATTTT ATTCACGTGC CCTTATGCCT GGAAGCAAAT AGTGCCGAAA ACCTGAGTGC ATTGCGCTTA ATTGCGGTTA AGTTAAGTCC GCTAATTTAT GAGGTAAACA GTGAAAAACG TAAGATACTG CATTTGGCAG GGGTTTTTGC CTGTAATTTT GTAAACCACA TGTACAGGTT GAGCCAGCAG ATTGTTGAAA AGCAAGGGCT CGACTTTGAG ATATTGCGAC CATTGATTAT GGAAACTGCT GTGAAGGCGC AAAATGCACT GCCGGAAGAT GTGCAGACCG GGCCGGCAGC AAGGAACGAC AAACAAACGA TACTAAAGCA TGAAGAATTA CTGCAAAAGT TGCCCCATTT GCTGGAAATC TATAAAATTT TAAGTAATAG CATTAAAAAA ACGCGATAA
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Protein sequence | MKIVCIGSGN VGTHMANAFK ENEADIVQVW SKDPANAAAL AFETGAQAIA DLEDIDLNAD LYLIAVKDDA IAKLVRALKA VNGLVVHTSG ATDMNVLSGI KNYGVFYPLQ TFSKEEPIDF IHVPLCLEAN SAENLSALRL IAVKLSPLIY EVNSEKRKIL HLAGVFACNF VNHMYRLSQQ IVEKQGLDFE ILRPLIMETA VKAQNALPED VQTGPAARND KQTILKHEEL LQKLPHLLEI YKILSNSIKK TR
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