Gene Phep_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3216 
Symbol 
ID8254335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3822526 
End bp3823284 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content42% 
IMG OID644936869 
Productoxidoreductase domain protein 
Protein accessionYP_003093473 
Protein GI255533101 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0684452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG TTTGTATAGG TTCAGGTAAT GTTGGCACGC ACATGGCCAA TGCCTTTAAA 
GAAAATGAAG CTGATATTGT TCAGGTATGG AGCAAAGATC CCGCGAATGC AGCTGCTTTG
GCCTTTGAAA CAGGTGCACA GGCCATTGCT GATCTGGAGG ATATAGACCT GAATGCCGAT
CTGTACCTGA TTGCAGTAAA AGACGATGCC ATTGCAAAGT TAGTTAGGGC TCTTAAAGCC
GTAAATGGCC TGGTAGTCCA TACTTCGGGT GCTACCGATA TGAATGTATT ATCGGGTATT
AAAAATTATG GCGTTTTTTA TCCTTTGCAA ACTTTCTCTA AAGAAGAACC GATAGATTTT
ATTCACGTGC CCTTATGCCT GGAAGCAAAT AGTGCCGAAA ACCTGAGTGC ATTGCGCTTA
ATTGCGGTTA AGTTAAGTCC GCTAATTTAT GAGGTAAACA GTGAAAAACG TAAGATACTG
CATTTGGCAG GGGTTTTTGC CTGTAATTTT GTAAACCACA TGTACAGGTT GAGCCAGCAG
ATTGTTGAAA AGCAAGGGCT CGACTTTGAG ATATTGCGAC CATTGATTAT GGAAACTGCT
GTGAAGGCGC AAAATGCACT GCCGGAAGAT GTGCAGACCG GGCCGGCAGC AAGGAACGAC
AAACAAACGA TACTAAAGCA TGAAGAATTA CTGCAAAAGT TGCCCCATTT GCTGGAAATC
TATAAAATTT TAAGTAATAG CATTAAAAAA ACGCGATAA
 
Protein sequence
MKIVCIGSGN VGTHMANAFK ENEADIVQVW SKDPANAAAL AFETGAQAIA DLEDIDLNAD 
LYLIAVKDDA IAKLVRALKA VNGLVVHTSG ATDMNVLSGI KNYGVFYPLQ TFSKEEPIDF
IHVPLCLEAN SAENLSALRL IAVKLSPLIY EVNSEKRKIL HLAGVFACNF VNHMYRLSQQ
IVEKQGLDFE ILRPLIMETA VKAQNALPED VQTGPAARND KQTILKHEEL LQKLPHLLEI
YKILSNSIKK TR