| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3169 |
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| Symbol | |
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| ID | 8254287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3771572 |
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| End bp | 3772393 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644936821 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003093426 |
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| Protein GI | 255533054 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.926354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGT CAGAAAATCA AAAGGTTATA CTATATAAAA CGGGATCAAC TGCTCAATTT
CCGGAAGATT TCCAAACACG GTTTCACACG CATATTTATT GTCAAAGTGG AAGCATAAAA
TTTGTTTTCA ATGGGAAGCA TTACCATTGT AAAAAGGGAG AATTTATCTT TTGGCTCGCA
GGTCTTGATG TGGCGGACTT ATCATTTTCA ATGAATTTTA AAGCAACACT CTTGTTTGTG
GACAGTGATT TATTGAACGC AAATTTACCA AGTGCGAATG CGAGTATAGA CAGCTATATA
CACTCCAAAG AAAATCCGAT TTTGCACCCG GAAAAAAAGG ACAAAGAGAG AATTTTAAAA
AATTTTCAGT TGCTGTATGA TAAATCCCGG GAAACAGACC ACCGATTCTT TGAGGAAGGG
CTGAAACTAC AAATGCAGCT ATTTATTTTA GAAATGTGGC ACATTTTTGA AGATGAACTC
GATAGACGAA AACGTAGTAT GCAAAGCGGA ACATTGTACG AACGGTTTAT GCAGCTAGTA
CAGGAACATT GCATAAGAGA ACGCGAAGTA AGGTTTTACA GCGATAAGCT GAACATCACA
CCTAAATATC TCAATTATAT TTGCAAAGCC AACACCCGGA TTACCGCTTC AGAATGGATA
CAGCGATATG CGAAAGAACG GATAGTACTT TTGTTAAAAA ACAAAAATCT GAATATTTCT
GAAATTGCCG ATGAAATGAA TTTTTCAAGC CGTTCGTTCT TTACCCGCTA TGTAAAAAAA
TGCTTAGGCG TTACCCCGAA GGAATATCGG GAGCGAGTAT GA
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| Protein sequence | MNMSENQKVI LYKTGSTAQF PEDFQTRFHT HIYCQSGSIK FVFNGKHYHC KKGEFIFWLA
GLDVADLSFS MNFKATLLFV DSDLLNANLP SANASIDSYI HSKENPILHP EKKDKERILK
NFQLLYDKSR ETDHRFFEEG LKLQMQLFIL EMWHIFEDEL DRRKRSMQSG TLYERFMQLV
QEHCIREREV RFYSDKLNIT PKYLNYICKA NTRITASEWI QRYAKERIVL LLKNKNLNIS
EIADEMNFSS RSFFTRYVKK CLGVTPKEYR ERV
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