| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3137 |
|---|
| Symbol | |
|---|
| ID | 8254255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3744505 |
|---|
| End bp | 3745437 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644936790 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_003093395 |
|---|
| Protein GI | 255533023 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.532617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA TTGTTATAAA AGAGTTTGGA GCTGCGGATA AACTGGAGAT TTCCGAAATA
GAGAAACCTC AGATCAGCGA CGATCAGGTA TTGATCAGGG TAAAAGCTGC AGGGATTAAT
CCTGTGGATA CAAAGATCAG ATCCGGAGCA CACAGATCTG CTAAAACACT TCAGCTGCCA
GCAGTTTTAG GTAAGGATGT AAGTGGGGTA ATTGAGCTGA CCGGTAAAAA TGTGCAGGGA
TTTAAGGTAG GGGACGCTGT TTTTGGCTGC GCAGCTCAAA CTTATGCTGA GTATGTGGCT
GCCAGCCCTG ACCTCATTGT AAAAAAACCG GAAAATATTA CTTTTGAAGA AGCTGCGGCA
GTTTCTTTGG CCGCACTTAC GGCCTATCAG GCCATTCATG AGCACCTTAA AATCAGGTCC
GGACAGCATG TTTTAGTCCA GTCTGCAGCC GGTGGCGTTG GCCATCTGGC TGTACAGTTG
GCCAGGATAG CGGGTGCTGT TGTTAGCGGG ACAGCTTCAG GCAGGAATAT CGGTTTTATA
AAAAGTCTTG GTGCAGATCA GGCAATTGAT TATAAAAATG AGCGGTTTGA AGAGGTTGTG
AAAGATCTTG ATGCAGTATT AGATACCATG GGTGGCGAAA TTTTGTACCG GTCCATTCAG
TGTGTTAAGC CCGGCGGAAC AGTTGTCTGT TTGCCCTCAT CTACAAAAGA CGATCCTAAG
GCCATTCAGT ATGCACAGGA GCGTGGGGTA TCGTTAATAT GGTTTATGAT GGAGCCTAAA
AAGGAACAAT TACAGGAAAT CTCGGACTTG CTGGCAGCCG GCCAATTAAA AGTATCGGTT
GAAAAAGTTT GGCCAATGGA AAGTATCGTC CAGGCCCACC AGGAGATAGA GGCCCATGGC
GTGCGCGGAA AATTAGTGGT CCGGATTGCT TAA
|
|---|
| Protein sequence | MKAIVIKEFG AADKLEISEI EKPQISDDQV LIRVKAAGIN PVDTKIRSGA HRSAKTLQLP
AVLGKDVSGV IELTGKNVQG FKVGDAVFGC AAQTYAEYVA ASPDLIVKKP ENITFEEAAA
VSLAALTAYQ AIHEHLKIRS GQHVLVQSAA GGVGHLAVQL ARIAGAVVSG TASGRNIGFI
KSLGADQAID YKNERFEEVV KDLDAVLDTM GGEILYRSIQ CVKPGGTVVC LPSSTKDDPK
AIQYAQERGV SLIWFMMEPK KEQLQEISDL LAAGQLKVSV EKVWPMESIV QAHQEIEAHG
VRGKLVVRIA
|
|---|
| |