| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3130 |
|---|
| Symbol | |
|---|
| ID | 8254248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3738156 |
|---|
| End bp | 3738893 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644936783 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003093388 |
|---|
| Protein GI | 255533016 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTGA TCAGCGCATT TACGGTGAAT GAGGCGCTGG CCCAAAGGCC TTCAAGAGGT
CAGAGTGGGG GTGGCCGACC TTCAGCAGGA GGTAGTACTG GTTCCAGGCC GCCCAGGCCA
AGTGTGGGCA CGCCGTCCAG ACCATCAACT CCTTCACACG GACATATTGG CCGGCCGCCA
GTGGTTGTGC GTCCGGGATA TCGACCCGGC TTCAGGCCTT ACCGCAGGCC ATATTATGGA
TACTATAACT TTTACAGGCC ATATCTGGGT TTGAGCATCA ATGTTCTGCC TTATGGTTAT
TATCCGTTTT ATTTTGGCGC AGACCAGTTT TATTATTCCG GGGGCTTGTT TTACAGGCAA
TACGACAACA ATTATAAAGT AGTAGTGCCA CCGGTAGGTG CCCAGGTGCC AAGCATTCCT
TCAGATGCTA AAGAAGTAGT GATCAACGGA CAAACCTTTT ATGAGTATAA AGGCGTTTAC
TACAATGCTG TACAGGATGC CAATGGTAAA ACCGTGTATG TGGTTGCCGG AAAAGATGGG
GTGCTGAATA CCGATAACAT TGCAGCCGAC AGCAATAGCG GTCCGCAGGT TGGGGACATA
GTAGACCAGC TACCTGATGG GTACCGCGAG GTATTTATTA AAGGGGAACA GTACTACGTT
TCTGAAGATG GGGTATACTA CGAGAAAATT GTTACCGATG GGAAAGTGAG CTATAAGGTA
ATTGGCCTGG GGAACTAA
|
|---|
| Protein sequence | MVLISAFTVN EALAQRPSRG QSGGGRPSAG GSTGSRPPRP SVGTPSRPST PSHGHIGRPP
VVVRPGYRPG FRPYRRPYYG YYNFYRPYLG LSINVLPYGY YPFYFGADQF YYSGGLFYRQ
YDNNYKVVVP PVGAQVPSIP SDAKEVVING QTFYEYKGVY YNAVQDANGK TVYVVAGKDG
VLNTDNIAAD SNSGPQVGDI VDQLPDGYRE VFIKGEQYYV SEDGVYYEKI VTDGKVSYKV
IGLGN
|
|---|
| |