| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3101 |
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| Symbol | |
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| ID | 8254219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3703158 |
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| End bp | 3704327 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936755 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003093360 |
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| Protein GI | 255532988 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.866891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.240373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCC AGAACCTTGA CTATTCCTAT TATCTGTCAT TATTTTGCTG CCTGCACCTT
TGGTTGCTGT GTTTATTTCT GTTCTTTAAA AAGAACCGAA GCATTGCCGA CCAGATCCTT
GCCTTGTTCC TGCTGGGTTT TTCTTTTATC CATGTGCAGC ACCTTGTGCT TCAAAAAGGG
TACTTAAATG AAATTCCATA CCTGGATCCG GTTATGGGGA TTGTCCTGTC GGCACTGGGC
CCTTTATTTT ATTTTTATGT GAGGGCCATG ACGGGGGAAC GGGAACTGTT AAAAAAATCA
AGACCACACT GGCTTATTTT AATTCCTTCT GTGATAAACC TGATTTTTCT GATGCTTACT
AAAAAAGCAG GGGAATTGCA TAATTATTAT TATGCAGATA CCAGGGGCGA AACAAAATAT
ACACTCGTTA ACCTTTTGCT GCTAATGGGG ATGACGGCTT ACCTGCTCTT TTACCTTATT
GCATCCATAC GTGTACTAAA CCGGCATACC GCTGGCATTA AAGCTTCTTA TTCCAATGTA
AAACGCCTGC AGCTGGGCTG GCTTAAAGAT TTGATTGTCA TATTAATGGT GTTTAGCTGT
ATCATTGCAC CGGTAACTAT CCTCATTGCA GATACCAAGG TGAGCCAGTT GAGCATAGCC
TATTTCAGTA CCTTCATTTA CTTTATCATT GTATACAAGT CATTAAATTA TTCTGTGGTA
TTTGCCCCGT TGGCCCTGCC GGAAGACCTG CCTCTAGCCT CCGAACCGGA GCTGCCACTG
CCGGTTACAG AGCGCTACCA GAAATCGGCC TTATCTCCTG CACAGGTAGA AGAGTATGGG
CATACGATAG AGATATTCCT GGTATCTAAT AAGCTGCTTT TTGATGAAGA CCTGTCGCTC
AGACAGATGG CCGATGTATT AAAACTATCG CCACATGTAT TGTCGGAAGT CATTAACCGT
TATTACAATA AAAGCTTTTT TGATCTGATC AATTCATTCA GGATTGAAGA AGCCAAAAAG
CAGTTAAGGA ATATCAACGA ACTGAACATC ACCATTGAAG GCATTGGTTA TAACTGTGGT
TTCGGGTCAA AAACTACATT TTACAGGGCT TTTAAAAAGC ATACCGGACA TACACCTACA
GGCTATGTGA CCCAAAATAG CATAACCTGA
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| Protein sequence | MAIQNLDYSY YLSLFCCLHL WLLCLFLFFK KNRSIADQIL ALFLLGFSFI HVQHLVLQKG
YLNEIPYLDP VMGIVLSALG PLFYFYVRAM TGERELLKKS RPHWLILIPS VINLIFLMLT
KKAGELHNYY YADTRGETKY TLVNLLLLMG MTAYLLFYLI ASIRVLNRHT AGIKASYSNV
KRLQLGWLKD LIVILMVFSC IIAPVTILIA DTKVSQLSIA YFSTFIYFII VYKSLNYSVV
FAPLALPEDL PLASEPELPL PVTERYQKSA LSPAQVEEYG HTIEIFLVSN KLLFDEDLSL
RQMADVLKLS PHVLSEVINR YYNKSFFDLI NSFRIEEAKK QLRNINELNI TIEGIGYNCG
FGSKTTFYRA FKKHTGHTPT GYVTQNSIT
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