| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3064 |
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| Symbol | |
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| ID | 8254181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3662029 |
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| End bp | 3662691 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644936717 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_003093323 |
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| Protein GI | 255532951 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00368747 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCGATGA AAATGATCAA GAAATTTACA TTACTGCTGT TTACATTGGG GACAGCTTAT
GCTGCTCATG CACAAACTGA TGCACAGGCC CGGACTATAC TGAATGCAGT AAGTAAAAAA
TACCGTTCTT ATGATATTGT CAAAACTGAT TTTACGCTGA TCATCGAGAG CCAGCAGGCC
AATGCCAAAG AAACCCAACA AGGTACTTTG TATGTAAAAG CAAACGCCAG TAAATATAAG
GTAAGCACTG GCGGGCAGGA AATGATCAGT GATGGTAAAA CTTTATGGAC TTATTTAAAA
GAAGAAAAGG AAGTTCAGGT TACGGATGCA GATAACAGCA ACAACGCCCT GAACCCTGCA
AAGATCTTCA CCATTTATGA GAGCGGCTTC AAGTATATAT ATACAGGAGA TAAAAAGGTA
GGTACTAAGA TTTATCAGAT GATTGACCTG ACACCTACAG ATATCAATAA ACCCTATTTT
AAGATCCGTT TAAGTATAGA TAAGGTAGCC AAGCAAATAG CTTCTGCTCT TATTCTGGAA
AAAAATGGCA ACAGGTATAC CTATAACGTA AGAACTTTTG TGCCTAATGT AAAGGTACCT
GAGTCTACTT TTACTTTCGA CAGCAAGAAA TATCCTGGCG TTGAAGTAGT GGATTTGAGG
TAA
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| Protein sequence | MPMKMIKKFT LLLFTLGTAY AAHAQTDAQA RTILNAVSKK YRSYDIVKTD FTLIIESQQA
NAKETQQGTL YVKANASKYK VSTGGQEMIS DGKTLWTYLK EEKEVQVTDA DNSNNALNPA
KIFTIYESGF KYIYTGDKKV GTKIYQMIDL TPTDINKPYF KIRLSIDKVA KQIASALILE
KNGNRYTYNV RTFVPNVKVP ESTFTFDSKK YPGVEVVDLR
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