Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3049 |
Symbol | |
ID | 8254165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3645181 |
End bp | 3645744 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936702 |
Product | hypothetical protein |
Protein accession | YP_003093309 |
Protein GI | 255532937 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.695462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0155554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCAG TAATCAATTT CGCAATTATT TTGGCCGCAG TAACTTTATT TGCAGCCTGT GGAAATACTC AAAAACCCGC TGAAGCAGAT CCTCATGCCG GACATAACCA TGCCCAGGGT GAAGGTCATA CAGCGCCTAC GGAACAAGCT ACTGCAGGTG TCAGCATTAA AGATGATAAA CTGAATGCAG TATACCAGCA TTATATACAC CTGAGCACCG CATTGGTAAA TGAGGATGTG GCAGAAGCAA AGGTGGCGGC TAGCGCCATT GAATTGGGTG CAAAAGAACT GACTGGCGGA ACTGCGCTGG TAACCTTAGC CTCAAAAATA ACTACTGGGG CAGATATTGA AGCACAAAGG ACTGTGTTTT CGGATCTGAG CAATGATTTT ATTGCACGTG TTAAAGCTTC AGGTTTAAAT TCTGGTGAAG TATATGTTGA GTACTGCCCT ATGGCACTGC ACGATAAAGG AGCTAGCTGG TTAAGTAATA AAAAAGAAAT CAGAAACCCC TATTTTGGCG AAAGCATGAT GACCTGCGGC GAAGTAAAAG AGATCATAAA ATAA
|
Protein sequence | MKPVINFAII LAAVTLFAAC GNTQKPAEAD PHAGHNHAQG EGHTAPTEQA TAGVSIKDDK LNAVYQHYIH LSTALVNEDV AEAKVAASAI ELGAKELTGG TALVTLASKI TTGADIEAQR TVFSDLSNDF IARVKASGLN SGEVYVEYCP MALHDKGASW LSNKKEIRNP YFGESMMTCG EVKEIIK
|
| |