Gene Phep_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3046 
Symbol 
ID8254161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3641867 
End bp3642358 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content38% 
IMG OID644936698 
Productregulatory protein RecX 
Protein accessionYP_003093306 
Protein GI255532934 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0143268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACA GGCCCGAAAA GAAACCAGTT AAACCGGATA AGAAAAGTGC TTTAGCTAAG 
GCTGAACATT ATTGTGCTTA CCAAGAACGC TCTCAGCAAG AACTGCGAGA TAAATTGTAT
GAGTGGGGGC TTTGGAGCAA TGAGGTGGAA GAAGTGATAT CGGAGCTGAT ACAAACCAAC
TTTTTAAATG AAGAGCGTTT TACAAAGGCT TACGTTTCGG GTAAGTTTAA CATAAAGCAC
TGGGGCAAGA TGAAAATAAA GCAGGGACTT AAATTGAAAC GTGTGCCCGA TAAGATGATT
TCGAATGCAC TTAAGGCTAT AGATTATGAT GAATATTTAA AGACTATATT GATGCTGGCA
GAAAAAAAGC TTCCTTCAAT AAGTGAAAAG GACCCTTATA AAAGAAAATA TAAGCTGGTG
TCTTATCTGC TGGCCAGAGG TTTTGAGAAT GATTTGATTT TTGAGGTGTT GAAGGCCAAT
GACTTAGCTT AA
 
Protein sequence
MMDRPEKKPV KPDKKSALAK AEHYCAYQER SQQELRDKLY EWGLWSNEVE EVISELIQTN 
FLNEERFTKA YVSGKFNIKH WGKMKIKQGL KLKRVPDKMI SNALKAIDYD EYLKTILMLA
EKKLPSISEK DPYKRKYKLV SYLLARGFEN DLIFEVLKAN DLA