Gene Phep_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3006 
Symbol 
ID8254118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3598980 
End bp3599963 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content42% 
IMG OID644936655 
Productaldo/keto reductase 
Protein accessionYP_003093266 
Protein GI255532894 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID[TIGR01293] voltage-dependent potassium channel beta subunit, animal 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.378905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACA GGCGTTTAGG AAAATCAGGA TTACAGGTAA GCGCATTGTC ATTAGGCAGC 
TGGCTTACTT TCGGGCAACA AATCAGTGAT AAAACCGCAG ATGAGTTAAT GGGAATGGCT
TATGATGCTG GTGTTAACTT TTTCGACAAT GCAGAAGGCT ATGCCGCAGG CAAATCTGAA
ATAGTAATGG GCAAAATACT GAAAGCTCAT AAATGGGAGC GGGAGTCCTT TGTGGTTTCA
AGCAAGGTGT TTTTTGGTAC GGAAAATAAA GGTCCTAACC GCATTGGATT ATCAAGAAAG
CATGTCATTG AAGCATGTAA TGGTGCTTTA AAAAGGTTGC AGGTAGATTA TCTGGATCTC
TACTTCTGTC ACCGTCCGGA TAGAAATACC CCCATAGAAG AGACAGTATG GGCCATGAAT
GGACTTTTAC AACAGGGAAA GATACTTTAC TGGGGAACGT CTGAATGGAA CGCAGTAGAG
ATCATGGAAG CCATAAGGGT AGCTAAACAA TACAATCTTA TCGGACCTAC CATGGAGCAG
CCCCAGTACA ACCTGATGGA GCGTAACAAG TTGGAAAATG AGTATTTACT GTTGTTTAAG
GAACATGGAT TGGGTACTAC CATATGGTCG CCTTTGGCTT CTGGCTTGCT TTCGGGCAAG
TATACTTCTA AAAAAACAAA AGATACACGC CTGGAACTTA AGGGGATGGA ATGGCTGAAA
GATGCGGTAC TGAACGAAGA GAAGTTGAAA AAAGCTGAAA AATTACAGGC GCTGGCCGAT
AAACTGAATG TTCCCCTGGC AAAATTATCG CTGGCATGGT GTCTTAAAAA TCCTAACGTA
AGTACAGTTA TCCTGGGTGC ATCTAAAACT GAACAGTTAA AAGAGAATTT AACCGCCTTA
GAGGTATTGC CTTTGTTAAC CGATGAAGTG ATGGATAAAA TTGAAGATCT TGTACAGACT
AAACCCAAAG TGGTTCAGTT TTAA
 
Protein sequence
MEYRRLGKSG LQVSALSLGS WLTFGQQISD KTADELMGMA YDAGVNFFDN AEGYAAGKSE 
IVMGKILKAH KWERESFVVS SKVFFGTENK GPNRIGLSRK HVIEACNGAL KRLQVDYLDL
YFCHRPDRNT PIEETVWAMN GLLQQGKILY WGTSEWNAVE IMEAIRVAKQ YNLIGPTMEQ
PQYNLMERNK LENEYLLLFK EHGLGTTIWS PLASGLLSGK YTSKKTKDTR LELKGMEWLK
DAVLNEEKLK KAEKLQALAD KLNVPLAKLS LAWCLKNPNV STVILGASKT EQLKENLTAL
EVLPLLTDEV MDKIEDLVQT KPKVVQF