Gene Phep_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2998 
Symbol 
ID8254110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3588659 
End bp3588961 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content39% 
IMG OID644936647 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_003093258 
Protein GI255532886 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.126069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAAA TCTTTGTTGG GGGGCTTAGG CCGGACGTTT CTGAATTGGA TCTGGTTATG 
TTTATAAGTC TTCGCGCCCA GGTAAACACC ATTAAAGTTG TACGCGATAA AATAACTAAA
CGGTGTAAAG GATATGCTTT TTTAGAAATG ACCAGTCAGG CTGAAGCCGA GAAAGCAGTT
GCTTTGTTAA ATGGAGAAGA ATATCAGGGT CAGGTATTGA ATATTAAAAT TTCGGAGGAA
GTTGCCCCTC CGCCTAAAAT AAAAACCAAT CATACTTATC AAAAGAAAAG ACCAAGAATC
TGA
 
Protein sequence
MVKIFVGGLR PDVSELDLVM FISLRAQVNT IKVVRDKITK RCKGYAFLEM TSQAEAEKAV 
ALLNGEEYQG QVLNIKISEE VAPPPKIKTN HTYQKKRPRI